Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1696 ATGGTTGATTTGGAAGTTCAGCTTCCCACTCCCTTCGATCCGTTCTTAGAAGACAAAGAATCGGATGCTCCTGGAACCAAAGGGTATGTGCATGTCAGGATTCAGCAGAGGAATGGAAAAAAGAGTCTGACCACAGTTCAAGGACTGAAGAAAGAGTTCAGCTACGGGAAGATTCTCAAGGACCTCAAGAAGGAGTTCTGCTGCAACGGCAACGTTGTGCAGGACAAGGAGCTGGGCAAGATCATTCAGCTTCAGGGTGATCAGCGCAAGAACGTCTCTCAATTCCTGGTTCAGGCCGGTCTGGTCAGAAAGGACCAGATCAAGATTCATGGTTTTTAA 339 0.4779 MVDLEVQLPTPFDPFLEDKESDAPGTKGYVHVRIQQRNGKKSLTTVQGLKKEFSYGKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVRKDQIKIHGF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1696 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Lele04g1696 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Lele04g1696 112 SUPERFAMILY eIF1-like 7 112 IPR036877 GO:0003743|GO:0006413
Lele04g1696 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Lele04g1696 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Lele04g1696 112 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 112 IPR005874 GO:0003743
Lele04g1696 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Lele04g1696 112 Gene3D - 2 112 - -
Lele04g1696 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1696 Lele-ChrLele04 21584965 21585303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1696 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 78.571 1.99e-64 189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1696 04 21584965 21585303 Lele04g1696 04 21584965 21585303 ECH
Lele01g1424 01 8760159 8761132 Lele04g1696 04 21584965 21585303 hybridization
Lele02g1713 02 20669986 20670420 Lele04g1696 04 21584965 21585303 hybridization