LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele04g1692	ATGAATAGTCATAACGACGAGGTGAATAATGAACATGGGCTGCCTTCGATTACCGGCGTTGGCGAAGGAGGTGGTGGTGAGGGTGCCGGTGGGGCAGCGGCAGCTGCCGAGGAGGTTGTCCTCAAGAAGGGTCCATGGACGGCAGCGGAGGATGCGGTGCTTATTGGTTATGTGACGAAGCATGGTGAAGGGAATTGGAATGCGGTGCAGAGGAATACGGGGTTGGCTCGATGTGGCAAGAGCTGTAGGTTGAGATGGACGAACCATTTGCGTCCAAATCTGAAGAAGGGCGCTTTCTCTCCTGAGGAGGAGAAGCTCATTCTTGAGCTTCATGCTCAGTTTGGCAACAAATGGGCTCGAATGGCCACTCTTTTACCTGGGCGAACAGACAATGAAATCAAGAACTACTGGAACACTAGGGTGAAGCGCCGGCAAAGACAAGGCCTGCCACTTTATTCCAGTGATTCTGATCAGCCAACCACATCTACAGCTCCGGCCACCTCTGGTACACGACCAGTCACCGGATCCACTGCTACTAAATTGGATTATTATAATCAGAACCGCTATCCTCTGCCTTCACTCCATACAGGATCCTCTTATTCTACTCATACCCCTTTCTTGGACCACAATTCTCCTTCTTCCTTCTTTAGTTTCCCCTCTCAACAGCCTACTTCATTACACATCACCCCACTCCAATCCAAGCGTTGCCGTACCACTTTTTCCCTCCCAGATGCACCTTTAACTAACCCATTGGTGGATCTTGATGGCCTCAACTTTCCAGCCCAATTTAATTCAAGTTCATGTCAAATCTTCCAGACCCCATTTGAGTTATCATCTTCATCAGTCCCTGGGGTTCCAAGCCCATCTTCCATTTTGTCAACCAAAATGGAGCTCCCTTCAAACCAATTTTCCCAATCCAATAACGACCTCCTGGAGGATCTTCTTCTGGAAGCTCAAGTATTGGTTTCTGGCCAGAATTCCAAGAATCGAACCTATTCGAGTTTCAGTGAAGGAAATGGTTTCTTAGACGGATGTATTAGCTTGGACGATATGCCTCAAAGCTCCGTTTACTGGTCTTCAGGACTGAAACCAAAGTCAGAACCATCAGACATGAATGAGCTACCCACACTGATCTCTGGAATGCCTTCAACTATTCAGGTTCCTGAGTGGCACAATGAAATTGCTTCACAAGCCTCCAATAATGTTCAATCTTCTGGTGCTATCATGGCGGATGATAATTTTGATCTTGATTTCAAGCCTACTGCTTCGTTGATTCCTGTCAACACCACAACAAACCCTAATGAAAACCCTGGTGGCTTCTTCTCATGGGACACCTTACCTGGACTCTGCTGA	1353	0.4767	MNSHNDEVNNEHGLPSITGVGEGGGGEGAGGAAAAAEEVVLKKGPWTAAEDAVLIGYVTKHGEGNWNAVQRNTGLARCGKSCRLRWTNHLRPNLKKGAFSPEEEKLILELHAQFGNKWARMATLLPGRTDNEIKNYWNTRVKRRQRQGLPLYSSDSDQPTTSTAPATSGTRPVTGSTATKLDYYNQNRYPLPSLHTGSSYSTHTPFLDHNSPSSFFSFPSQQPTSLHITPLQSKRCRTTFSLPDAPLTNPLVDLDGLNFPAQFNSSSCQIFQTPFELSSSSVPGVPSPSSILSTKMELPSNQFSQSNNDLLEDLLLEAQVLVSGQNSKNRTYSSFSEGNGFLDGCISLDDMPQSSVYWSSGLKPKSEPSDMNELPTLISGMPSTIQVPEWHNEIASQASNNVQSSGAIMADDNFDLDFKPTASLIPVNTTTNPNENPGGFFSWDTLPGLC	450

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele04g1692	450	MobiDBLite	consensus disorder prediction	1	30	-	-
	Lele04g1692	450	FunFam	Transcription factor GAMYB	98	144	-	-
	Lele04g1692	450	ProSiteProfiles	Myb-like domain profile.	91	141	IPR001005	-
	Lele04g1692	450	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	91	145	IPR017930	-
	Lele04g1692	450	ProSiteProfiles	Myb-like domain profile.	38	90	IPR001005	-
	Lele04g1692	450	MobiDBLite	consensus disorder prediction	149	181	-	-
	Lele04g1692	450	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	41	90	IPR017930	-
	Lele04g1692	450	Pfam	Myb-like DNA-binding domain	43	90	IPR001005	-
	Lele04g1692	450	Pfam	Myb-like DNA-binding domain	96	139	IPR001005	-
	Lele04g1692	450	Gene3D	-	42	95	-	-
	Lele04g1692	450	CDD	SANT	45	90	IPR001005	-
	Lele04g1692	450	PANTHER	TRANSCRIPTION FACTOR MYB33-RELATED	26	409	-	-
	Lele04g1692	450	SMART	sant	42	92	IPR001005	-
	Lele04g1692	450	SMART	sant	95	143	IPR001005	-
	Lele04g1692	450	CDD	SANT	98	139	IPR001005	-
	Lele04g1692	450	MobiDBLite	consensus disorder prediction	147	181	-	-
	Lele04g1692	450	SUPERFAMILY	Homeodomain-like	42	137	IPR009057	-
	Lele04g1692	450	FunFam	MYB-related transcription factor	42	95	-	-
	Lele04g1692	450	Gene3D	-	98	144	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele04g1692	Lele-ChrLele04	21556222	21558883	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele04g1692	17	450	MYB Transcription Factor Family	AT4G26930	37.901	8.80e-70	224

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Lele04g1692		Myb_DNA-binding	2.3e-11	CL0123