Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1621 ATGCAATCCCCGACAACATCGTCCTTCACTTACACTCTGTTCTTAACTAACAAGAACCTTATTCTTCTTCTTCTTCTCCTTCATGTCTTGTTCATCATGGTTTGTGCAGATCAAGGTGATGGGTTTGCAGAATCTGAGTCTTTCTTCAGTTTTATCAGAGCCATTGATCCCCAGAACGTGCTTCATATTAATGTGTCGTCATCATCATCATCATCATCACATCCATGCATGATGATGAAGTTGAAGGGTGTTAGATGCGATTCTGAAGGTGGCAACATTGTAGAGATCAGGCAATGTTCCAAACTCAGTTCTTCGCTGTTCCATGTTGAGTTATCTGAATCTCTCAAGCAATCATCTAAGTGGGAAAATTCCCAGAGTCTTAATGATGAAACTCAGAATTCAGGTTTCTGGGAAAAAACTGCAGATAATAATGAGACCTTGAAGAACAGTAAGCAGTTTCATATCAGAAAGGCTCCTACATCAACTGAGGCGAACGAAGAAGAAGAAGAGATTAGAGATACTGCAGAAGATGAGCTTGTGTTCTTTGAAGAGAAAGAGAGATTCAGAATGGAGGATCTTCTTGAAGCGAGTGCTGAGTTAAGAAGCGAAAGCTTCTGTAGTTGTCTTTATAAGGTAAGGCCGCAGAAGAAGAAGAAGAATGGTGGAGGGCATTATGCAGTGAAGAGATTGAAGAATTTGAAGATATCTGCAAATGAATTCAGTGAAACATTGAGGAAGGTAAGCAAGTTGAAACATCCAAATATCCTTCCCCTTGTTGGTTACCGTTCTGCAAGTGAAGAAAAACTCGTCATTTACAGATATCAGAACAATGGAAGTCTCCTAGATCTTTTCAAGGTGGGCATTTCCTGTGTTAAACGCAGCCCTCATGTGCGTTTCGAATCTGCCAGAAACTCGACCTTCCATGGAAGAGATTCTGGAGATGATAGAGGAAGTGATGATGAAGGAGAAAGAAGATCAAGAACGTGA 987 0.4073 MQSPTTSSFTYTLFLTNKNLILLLLLLHVLFIMVCADQGDGFAESESFFSFIRAIDPQNVLHINVSSSSSSSSHPCMMMKLKGVRCDSEGGNIVEIRQCSKLSSSLFHVELSESLKQSSKWENSQSLNDETQNSGFWEKTADNNETLKNSKQFHIRKAPTSTEANEEEEEIRDTAEDELVFFEEKERFRMEDLLEASAELRSESFCSCLYKVRPQKKKKNGGGHYAVKRLKNLKISANEFSETLRKVSKLKHPNILPLVGYRSASEEKLVIYRYQNNGSLLDLFKVGISCVKRSPHVRFESARNSTFHGRDSGDDRGSDDEGERRSRT 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1621 328 MobiDBLite consensus disorder prediction 148 170 - -
Lele04g1621 328 Coils Coil 165 185 - -
Lele04g1621 328 Gene3D Phosphorylase Kinase; domain 1 146 274 - -
Lele04g1621 328 MobiDBLite consensus disorder prediction 302 328 - -
Lele04g1621 328 PANTHER OS05G0588300 PROTEIN 174 280 - -
Lele04g1621 328 SUPERFAMILY Protein kinase-like (PK-like) 221 285 IPR011009 -
Lele04g1621 328 Pfam Protein tyrosine and serine/threonine kinase 213 284 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1621 Lele-ChrLele04 21089816 21092368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1621 167 284 Receptor kinase-like Gene Family AT2G36570 36.975 5.85e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele04g1621 PK_Tyr_Ser-Thr 1e-05 CL0016