Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1620 ATGCCGATTGTGAAGCCTGACCAATCGGGAGATTCCGAACCGTTCGTCGAAATCGACCCAACCGGAAGGTACGGCCGATACGGTGAGCTGTTAGGTTCCGGTGCGGTGAAGAAGGTGTACAGGGCATTCGATCAAGAGGAAGGAATAGAGGTGGCGTGGAACCAGGTGAAGCTAAGGAACTTCAGCGACGACCCGGCCATGTTGGAACGGCTCTACTGCGAAGTGAGATTGCTGAGAAGCCTCACCAATAAGAACATCATAGCGCTGTACAACTTCTGGAGGGACGACGAACGGAGCACTCTGAACTTCATCACTGAAGTCTGTACGAGCGGGAATCTGAGAGAGTACAGGAAGAAGCACAGGCATGTGTCGATGAAGGCTCTGAAGAAGTGGTCGAAGCAGATTCTAAAAGGTTTGAACTATATGCATACGCACGAGCCTTGTATCATCCATAGAGATCTCAATTGCAGCAATATTTTCGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGGTTGGCAGCAATAGTGGGGAAGAACCACTCTGCGCATTCAATTTTGGGGACGCCGGAATTCATGGCGCCGGAGTTATATGACGAGGACTACACGGAGCTAGTGGACATATACTCATTTGGGATGTGTGTGTTGGAGATGGTGACAATGGAGATTCCTTACAGCGAGTGTGACAACGTGGCAAGGATATACAAGAAGGTTTCATCTGGGGTGAGACCTGAGGCACTGAACAAGGTCAGAGATCAAGAGGTTAAAGCTTTCATTGAGAGGTGCCTTGCTCAACCAAGGGCAAGACCTTCTGCTGCTCAGCTTCTCAGGGATTCGTTCTTTGATAGCATTGTTGACGATGACGAAAATGACAATTCTATTTCCTAA 894 0.4888 MPIVKPDQSGDSEPFVEIDPTGRYGRYGELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDDPAMLERLYCEVRLLRSLTNKNIIALYNFWRDDERSTLNFITEVCTSGNLREYRKKHRHVSMKALKKWSKQILKGLNYMHTHEPCIIHRDLNCSNIFVNGNTGQVKIGDLGLAAIVGKNHSAHSILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTMEIPYSECDNVARIYKKVSSGVRPEALNKVRDQEVKAFIERCLAQPRARPSAAQLLRDSFFDSIVDDDENDNSIS 297
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1620 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 285 - -
Lele04g1620 297 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1620 297 Gene3D Transferase(Phosphotransferase) domain 1 108 288 - -
Lele04g1620 297 FunFam Probable serine/threonine-protein kinase WNK1 10 106 - -
Lele04g1620 297 SUPERFAMILY Protein kinase-like (PK-like) 21 289 IPR011009 -
Lele04g1620 297 FunFam probable serine/threonine-protein kinase WNK9 108 289 - -
Lele04g1620 297 Gene3D Phosphorylase Kinase; domain 1 10 106 - -
Lele04g1620 297 PIRSF TyrPK_CSF1-R 25 129 - -
Lele04g1620 297 PIRSF TyrPK_CSF1-R 95 295 - -
Lele04g1620 297 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1620 297 CDD STKc_WNK 23 283 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele04g1620 Lele-ChrLele04 21083039 21084765 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1620 7 287 MAP Kinase Kinase Kinase AT5G55560 82.206 0.0 500
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele04g1620 Pkinase 2e-52 CL0016