Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1617 ATGGACGCCGCTATCAACTCCGCCGATGCCCGCTCCGGTTCCGACTTCCGGCTCCGACCGGTCTCTTCCTCTGATTCAGCTCAATTCGTCGTTTCCCGAGGTGCAAGGTACAAGCTCATGTCCCCTGCTAGTCTTCCGATCTCTAGGTCGCCTTGTATCACGATTCCGCCTGGCCTCAGTCCGTCGTCGTTTCTTGAGTCCCCGGTCCTTCTCTCCAACGTCAAGGTGGAGCCTTCACCAACTACTGGGTCCCTTACTAAACCCATGTCTGTTCAGGAATCTGTTTCGTCTGCTACCTATCCTGTATCCACTGTACGCTTTGAAACCAATACTGTTGATGACAAAATATCTGGCTTCTTTGAGTTTAACTCAAACAATAGATCGAATATGGCTCCCACAGATTTGAACAGCCATGTAAACGAACTATCTATGCAAATACAAGGTTCAAGCCAAGCTCAAGCTTCTGCTTCATCTCCATTAGTGAAAAGTGAGATGGTAATGCCGTCAGATGAATTAAGTTTATCATCACCTGTTCAAATGGTTTGTTCAGGGGCTAGTGCTCCTGTTCAAGCCGATATGGATGGGTCTAATCCCAGAGGCAATGTAGTAAATGTGCTTCAAGCTTCACAAGTTGAAGTTAGAGGCAGTGGTGTCTCAGTTGCTGCCGAGAGAACGTCTGATGATGGATATAATTGGCGGAAATATGGACAGAAGCATGTTAAAGGGAGTGAATTTCCACGCTGCTATTACAAATGTACACATCCTAACTGTGAAGTGAAAAAACTGTTTGAACGCTCTCATGATGGCCAAATCACTGAGATAATTTACAAGGGATCACATGATCATCCTAAACCTCAACCAAGTCGCAGATACTCTACTGGTACTAGTATGTCTATGCATGAGGAGAGATTTGAGAAGCCTTCATCTTTGTCCTGCCAAGATGTCAATATGTATGGTCAAGAATCTCACGCTACCGAGCCCAACAGTAACCCAGAGTTGTCTGTTGTAGCAGCAAATGATGATGGTCGTGAGGGTGCAGGATTAGCTTCCAATAGGATCAATGATGAGGTTGATGATGACGACCCCTTCTCAAAGCGAAGGAAGGTGGAGAATGGAAATGCTGACATCACTCATATAGTTAAGCCTATTCGAGAACCAAGGGTTGTTGTACAAACTCTAAGTGAAGTTGACATATTGGATGATGGGTATCGCTGGCGAAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTACTACAAATGCACAAATGCCGGTTGCCCTGTTAGAAAACATGTGGAGAGGGCTTCTCATGATCCCAAAGCAGTAATAACCGCTTATGAGGGTAAGCACAATCATGATGTACCTACTGCAAGGAATAGTAGCCATGATACAGCAGGACCAGCAGCTCCTGTTGGACAGACACGAATAAGATCGGAAGAAAGCGATACCATTAGCCTCGACCTTGGGATGGGTATCAGCTCGGCTGCTGAAAATAAATTGAAGGGGCAAGGGCAAATGCTACTCTCTGAATTTGGGAATGGTCAAAGTTATGCCAACAATTCCAATTTCAAGTTTGTTCATAATGCCCCAGCTCCAGCATACTTTGGTCTTCTAAACAATGGCTCAAATCCATTCGGATCTTCTAGAGAACCCCCATCTTTGAACCATACCACATATCGGTGCCCGCAGCCGCAGGGCATGGGAAGAATACTAACAGGTCCATGA 1737 0.4588 MDAAINSADARSGSDFRLRPVSSSDSAQFVVSRGARYKLMSPASLPISRSPCITIPPGLSPSSFLESPVLLSNVKVEPSPTTGSLTKPMSVQESVSSATYPVSTVRFETNTVDDKISGFFEFNSNNRSNMAPTDLNSHVNELSMQIQGSSQAQASASSPLVKSEMVMPSDELSLSSPVQMVCSGASAPVQADMDGSNPRGNVVNVLQASQVEVRGSGVSVAAERTSDDGYNWRKYGQKHVKGSEFPRCYYKCTHPNCEVKKLFERSHDGQITEIIYKGSHDHPKPQPSRRYSTGTSMSMHEERFEKPSSLSCQDVNMYGQESHATEPNSNPELSVVAANDDGREGAGLASNRINDEVDDDDPFSKRRKVENGNADITHIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITAYEGKHNHDVPTARNSSHDTAGPAAPVGQTRIRSEESDTISLDLGMGISSAAENKLKGQGQMLLSEFGNGQSYANNSNFKFVHNAPAPAYFGLLNNGSNPFGSSREPPSLNHTTYRCPQPQGMGRILTGP 578
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1617 578 Pfam WRKY DNA -binding domain 400 456 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1617 578 Pfam WRKY DNA -binding domain 227 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1617 578 SUPERFAMILY WRKY DNA-binding domain 223 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1617 578 SUPERFAMILY WRKY DNA-binding domain 391 459 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1617 578 FunFam WRKY transcription factor 33 386 452 - -
Lele04g1617 578 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 483 IPR044810 GO:0003700
Lele04g1617 578 FunFam WRKY transcription factor 215 286 - -
Lele04g1617 578 SMART WRKY_cls 226 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1617 578 SMART WRKY_cls 399 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1617 578 MobiDBLite consensus disorder prediction 342 362 - -
Lele04g1617 578 MobiDBLite consensus disorder prediction 456 480 - -
Lele04g1617 578 MobiDBLite consensus disorder prediction 275 310 - -
Lele04g1617 578 ProSiteProfiles WRKY domain profile. 394 459 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1617 578 Gene3D WRKY domain 217 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1617 578 Gene3D WRKY domain 384 460 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1617 578 ProSiteProfiles WRKY domain profile. 221 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele04g1617 Lele-ChrLele04 21059304 21063355 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1617 40 578 WRKY Transcription Factor Family AT4G26640 55.676 0.0 524
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele04g1617 WRKY 4.9e-25 CL0274