Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1616 ATGGAAACTTCCGCGAAACATTCCTACGGGTCTGGAAGGTTCTATGTTGAGCACCAAGACTATAACTCATCAGATAACACCAGCCTAGCAACTTACTCTTCAGTTCAAACTTTAGAACAACATTACACCCTAGAATCTTCCTCAAGAACAAACAGTTTTCTGAACCATAATAATTCTCCATCCACTGCCAATTTCTCACCTACTGACAGCCCGCCATCACAGCTGGAGTCAAATTCTTGTGCCCTAATGTCTCAACACTCCCTCGAAATTATCAACGGCTCGCTAGAGAATGAATCTTGCTTGACAAATGACCTCGATGACTTAAGCCATGTGATAAGAGAGTTAGAAACTGCTATGCGGGGACCTGATGCAGAAATTTTGGGGATGAATGATACTATAGTTCCTATAGAATCTAATCAGATTTTGTCCGAGGCAGAGAAGTGGAAGCTAACATTGGACATAGTATCTAAAGGGGATTTGAAAGAGATGCTTTATGCTTGTGCAAAAGCGATGGATGCAAGTGATATGGAGACAACTGAATTGTTGATGTCTGAGATTCGGAAAGTGGTTTCCATTTCGGGCAACCCAGTCCAACGAATAGGAGCTTATATGTTGGAATCCCTTGTGGCAAGGATGGCCTGTTCTGGAAGTGCAATCTACATGGCCTTAAAATGCAAGGAGCCTACTGGTAATGAACTGCTTTCCTACATGCACTTGCTGTATGAAATCTGTCCATACTTCAAGTTTGGGTATTTGTCAGCAAATGGGGCAATTGCTGAAGCCATGAAGGAAGAAAATAGAATCCATATTATTGATTTTCAGATTAACCAGGGCAGCCAGTGGATAAGCCTAATTCAGGCTCTTGCTGGACGACCAGGTGGGCCTCCAAAGCTCAGAATAACTGGTTTTGATGACTCTACTTCGAATTTTGCTCGTGGAGGGGGCCTCAATATTGTGGGGAGAAGACTAACAGCGCTTGCACAATCATGTCAGGTTCCCTTTGAGTTCCATGCTGCTGGAGTTGCTCCTTCAAAGGTGCAACTCGAAGACATTATGCTTCAACCTGACGAAGCTCTTGCTGTAAATTTTGCCATGATGCTGCACCATATACCGGATGAGAGTGTGGACAGTCACAATCCTCGTGACCGGTTGTTGAGGTTGGCAAAGCACTTGTGCCCCAAAGTAGTGACTCTTGTGGAGCAGGAATCCAACACCAACCGTGCCCCATTCTTCCCTCGTTTTGCTGAGACACTGAGCTATTACTTGCCTATTTTTGAGTCAATTGATAAAGTTCTACCAAGGGAGCACAAGGAGAGGATCAATGTGGAACAACACTGTCTGGCTCGAGAACTTGTCAACTTAGTAGCATGTGAAGGAGTGGAAAGGGTAGAACGCCACGAGCCTTTGAATATGTGGAGGTCGCGCTTTGCCATGGCTGGATTTAAGCCATATCCGTTGAGCTCCTTCGTGAATTCTACCATCAAGAATCTGCTGGAGAACTACTGTGGAAATTACACTCTAGAAGAGAGAGATGGTGCACTATACCTTGGTTGGATGAATCGACCTCTTGTTGCCTCTTGTGCTTGGAGGTAA 1593 0.447 METSAKHSYGSGRFYVEHQDYNSSDNTSLATYSSVQTLEQHYTLESSSRTNSFLNHNNSPSTANFSPTDSPPSQLESNSCALMSQHSLEIINGSLENESCLTNDLDDLSHVIRELETAMRGPDAEILGMNDTIVPIESNQILSEAEKWKLTLDIVSKGDLKEMLYACAKAMDASDMETTELLMSEIRKVVSISGNPVQRIGAYMLESLVARMACSGSAIYMALKCKEPTGNELLSYMHLLYEICPYFKFGYLSANGAIAEAMKEENRIHIIDFQINQGSQWISLIQALAGRPGGPPKLRITGFDDSTSNFARGGGLNIVGRRLTALAQSCQVPFEFHAAGVAPSKVQLEDIMLQPDEALAVNFAMMLHHIPDESVDSHNPRDRLLRLAKHLCPKVVTLVEQESNTNRAPFFPRFAETLSYYLPIFESIDKVLPREHKERINVEQHCLARELVNLVACEGVERVERHEPLNMWRSRFAMAGFKPYPLSSFVNSTIKNLLENYCGNYTLEERDGALYLGWMNRPLVASCAWR 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1616 530 Pfam GRAS domain family 160 530 IPR005202 -
Lele04g1616 530 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 94 524 IPR005202 -
Lele04g1616 530 MobiDBLite consensus disorder prediction 46 77 - -
Lele04g1616 530 ProSiteProfiles GRAS family profile. 151 530 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1616 Lele-ChrLele04 21054730 21056322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1616 1 530 GRAS Transcription Factor Family AT1G50600 56.903 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele04g1616 GRAS 2.5e-128 CL0063