Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1614 ATGGCAAATATTTCGACTTTCTACCCTTACAATCCTGTTCGACCTTCTTCTTCTTCTACTTCATCTCCGTCTTCGAATCCGAGCAAGTGGCATTTGGTCTCAAAGTCTGCTCGTGGAAGAGGACCACACAAGTTTGTGGTGCTTACGGCGCATTCCAACCCTAAGATTCTGAAGACTAATCGGAAAACGAGGTTCGGACAGGCGCTATCTCCGTATGACAGCGATGCGGATGCGGATGCATTGGAGGAGGAGGAGGACGACGACGACAATTGGCTATCAGATGTTGGCAGAAATTTAAAGGAGAACGGATATCCTCGATTCTCTGAAGAGATTAATTTGGATAAGAAATGGATTCCACTTCTAGACTACTTAAGCACATTTGGAATGAAGGAATCGCACTTTATCCAAATTTATGGAAGGCACATGTCCTCACTTCAAATTAATGTATGTTCTGCTCAGGAAAGGTTAGAATACTTAATGAGTGTTGGTGTCAAACATAGAGATGTAAAAAGAATCATTTTGAGACAGCCACAAATTCTGGAGTATACAGTGGAGAACAATTTAAAGGTTCATGTTGCATTTTTGATGGGTTTGGGAATACCAAATTCCAGAGTAGGTCAAATAATTGCTGCTGCTCCATCCCTGTTTTCTTATAGTGTTGAAAAGTCTTTAAAACCAACTGTAAGATATCTAGTTGAGGAAGTTGGCATCAAGGAAAAGGATCTGAGTAAAGTCATTCAGCTGAGCCCACAAATTCTCGTTCAGCGTATTGACATTTCCTGGAATATTCGCATAGATGGTGGATTACTGCCTAGGATTAACTTTCTGAGGAGCATAGGAATGAAAAATTCAGACATCCTAAAAGTCCTGACTAGTCTTACACAGGTCCTTTCCCTGTCCCTGGAGGAGAATCTAAAGCCCAAGTACTTGTATCTGGTAAATGAACTTCAGAATGAGGTTCATTCCTTGACCAAATATCCAATGTACCTTAGCTTGTCTTTGGACCAGAGAATACGTCCTCGTCATAGGTTCTTGGTTTCCCTGAAGAAAGCTCCAAAAGGACCATTCCCACTTGGATCACTTGTCCCAACTGATGAATGCTTTTGTCAGCAGTGGGCATGGACTAGTTTGGATAAGTATTTGGCTTTTCGTCAGAGGCTTTTACTCAAGAAATTTGCTGCAAAATATGAAAAATCAAAATAA 1203 0.4106 MANISTFYPYNPVRPSSSSTSSPSSNPSKWHLVSKSARGRGPHKFVVLTAHSNPKILKTNRKTRFGQALSPYDSDADADALEEEEDDDDNWLSDVGRNLKENGYPRFSEEINLDKKWIPLLDYLSTFGMKESHFIQIYGRHMSSLQINVCSAQERLEYLMSVGVKHRDVKRIILRQPQILEYTVENNLKVHVAFLMGLGIPNSRVGQIIAAAPSLFSYSVEKSLKPTVRYLVEEVGIKEKDLSKVIQLSPQILVQRIDISWNIRIDGGLLPRINFLRSIGMKNSDILKVLTSLTQVLSLSLEENLKPKYLYLVNELQNEVHSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQQWAWTSLDKYLAFRQRLLLKKFAAKYEKSK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1614 400 MobiDBLite consensus disorder prediction 1 37 - -
Lele04g1614 400 Gene3D Transcription termination factor 3, mitochondrial 153 387 IPR038538 -
Lele04g1614 400 SMART mt_12 243 282 IPR003690 GO:0003690|GO:0006355
Lele04g1614 400 SMART mt_12 206 238 IPR003690 GO:0003690|GO:0006355
Lele04g1614 400 SMART mt_12 320 351 IPR003690 GO:0003690|GO:0006355
Lele04g1614 400 SMART mt_12 170 201 IPR003690 GO:0003690|GO:0006355
Lele04g1614 400 SMART mt_12 287 319 IPR003690 GO:0003690|GO:0006355
Lele04g1614 400 MobiDBLite consensus disorder prediction 1 32 - -
Lele04g1614 400 Pfam mTERF 115 196 IPR003690 GO:0003690|GO:0006355
Lele04g1614 400 Pfam mTERF 188 347 IPR003690 GO:0003690|GO:0006355
Lele04g1614 400 PANTHER CGI-12 PROTEIN-RELATED 151 296 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1614 Lele-ChrLele04 21042885 21045560 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele04g1614 mTERF 1.3e-35 No_clan