Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1603 ATGCCAGTTGGGGCAATGATGGCTCGTTATTTGAAACCATTCGTCCAAGCTTCTAGATCTTCCTGGTTTAATCTTCACAGAGCTTGCCAGATTCTAGCATACATAACTGGAACCATTGGAGTGGCTCTAGGAATCTACATTGGAACCAGATTATGTTCATGTTTACATTGGTCATCGTTCTCGCCATCTTCGATATGTTCAAAGGTTTCTCCACTTCAAGCTCGTATATCGTCATCATGGGTCGACATGGAAGAATGCTGCTTACTTAGGAATCATAGATTCATTGGGCTCTGTGGCTCTCTCATATTGGAAGTCACTACTTGGGTTCTGGCGTGCAAGAACAGGAAGAAGAAGGAGGAAGAGGAAGATGTCAAACCTAAAGGAGGTGACAGTAATTTCAGAGCTTCCTCTTTCTCTCCTAACCATTTCCCTGTTGCTCTCTCCTCTCATCCCACCCTGAGCTGCATTGGATGTGCATTTTCTAGGCTCCGCTGGGCTCACACTTTTCACGTCCATGGCAATTTCTGGTGCATTCCTGGAGTTCTGTTGACTCCCTCCGGTCTTTCCTTCAAGATGGCCACAAATGATTGCCGTTTTGTAGAATGGAAGGAGCAGTTTATTTCACAGGAGCGTGGCAATCGTGTAGTCCACTATTACCTGAAGGATTCTGCTGGGGATTCCATACTTGCAGTTGTGGGCACTGAGAGGAGCCTGAGACACATGTTCTATGTTGTTGCTGATGAGTTTCTTGAAGTTTTTGGGAAGGAGGGTGCCATCCATGCCGGTTTCAAATGGCGGTCCAGAAGAGAGGTCGTCGATTGGTTGACATCAATGCTATCAAAGCAGCATCAGCTGGGAGACAAGAGTGCGTTGCCAAATCATAACTTGACACAAGCTCATGAGACCACAAATAGCAGTCTCAAAGAATTTATCGATCTGCATACACAGATATCAGATAAGGGCCTTCTAATGAGCAGCTTCAAAGGACAAAATTCTGACATTGTTTGGTCAGGCGTTGCCTGGACATGTGGCAAACAGCTTAAACACTATCCTGCTTTTTCCAGGAATGGGATCAAAATAGCTATTCAATCTTTCGTCTTTGTCATGGCAACGGGAGAGAATCATTATATTGCATATTTGGAGGACATGTACGAAGACAGGAGGGGCCAGAAAAAGGTTAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAATTCCCGTGAGAAATCCTCACCCTCAAGAAGTTTTTATCACATCTTATTCTCAAGTGATTAGTGCTGAGTGTGTTGATGGCCCTGCTACAGTCTTGACTCGGGAACATTATGGAAAACTCTTGCCTGCGTTTTCTTCTGCCTCATCAAATAGAATCCATTTGTGCTTTAGGCAGTTCAGAAACAACAAAGTGAAGGCCTTTGACTTGAGTAAATTGCGTGGTTACCATGATCAACCAATTCTCTCTTGCTTGAACCTTGATTCCTTCCAAAACCCTAAATCTAATAACCTTGCAGAAGAGGATGAAGAGTTGAGCCTAGGTGATGATGTAAGGCCTGAAGGTAAGAGGAGCAAAAGAGGTAGAGGGTCTTCCCAGCATTCGATAGATCATCGAGTTAGGAAATTAAGTAGAAGTCAACAAATGATGGTGGACAAAACCATTGAGAATGTAGATTATGCTAGGCCAGATAGGAGATTACTTTCCCGGAAACAGGTTGATTATCAGCCCTGGTATAACTCCAAATACAAAGTTGATGACAAGATAGAGTTACTCTGTCAAGACAGTGGCATAAGAGGCTGCTGGTTCAGGTGTACAGTTGTGCAAGTATCCCGGAAACAGATAAAAGTCCAATACAATGATGTGCAGGATGAAGATGGAGGCGGAAATCTTGAGGAGTGGATCCCGGCTTTCAAACTTGCCATGTCTGATAAACTTGGGATGAGGCATTCTGGCCGGCCCGCCATCAGGCCAGCCCCAACTCATGAGGGGAAACAAGAACCGGTTATTGAGGTCGGAACTGCAGTAGATGCATGGTGGAGTGATGGTTGGTGGGAGGGGGTTGTTAGTGGAACTGGTGACGGTGATGATGATAATGTGCAAGTTTACTTTCCTGGTGAAGGTTTGTTAAGGAAAGTGTCCAAAAAGGATCTAAGAGAATCAAGAGATTGGCTGGGAGACCGATGGGTCGATATTGAGCTAAAGCCTAATGTAGCCTCTACCATATTTGCAGTTAATAGCTCTAACACAAAGTTTTCAGTGTCCCCATCTACCACTAAAGATGTTGACTCTTCTGGGGTTGTTATTTCATGTCAAGATGTTCCTATTAATGAGAAATCCAATGAACTGAACGATGTTGCTGAAGACATGAATCAGGTTATGGATAACAAGCCCACTTCACAAGAAGAGACAAGTACTGAAGTTGTTGAGACTGAGCAACATGGAAGTTGCGATAACGATAACGAAGATAACCATGACAACAACGAAGATAATCATGACAACGACAAAGACAATAAAGAAGAGAATGATGGCAATGATAACAAAAGGGTTGATAATGATGTGAAGGATATGGAGGTGCTTGGGACTTCTGAGGAGGACACGAAAGCCGTGGAACCCATGGAAGTGGCTGTTTAA 2631 0.4398 MPVGAMMARYLKPFVQASRSSWFNLHRACQILAYITGTIGVALGIYIGTRLCSCLHWSSFSPSSICSKVSPLQARISSSWVDMEECCLLRNHRFIGLCGSLILEVTTWVLACKNRKKKEEEEDVKPKGGDSNFRASSFSPNHFPVALSSHPTLSCIGCAFSRLRWAHTFHVHGNFWCIPGVLLTPSGLSFKMATNDCRFVEWKEQFISQERGNRVVHYYLKDSAGDSILAVVGTERSLRHMFYVVADEFLEVFGKEGAIHAGFKWRSRREVVDWLTSMLSKQHQLGDKSALPNHNLTQAHETTNSSLKEFIDLHTQISDKGLLMSSFKGQNSDIVWSGVAWTCGKQLKHYPAFSRNGIKIAIQSFVFVMATGENHYIAYLEDMYEDRRGQKKVKVRWFHHNQEVKGVIPVRNPHPQEVFITSYSQVISAECVDGPATVLTREHYGKLLPAFSSASSNRIHLCFRQFRNNKVKAFDLSKLRGYHDQPILSCLNLDSFQNPKSNNLAEEDEELSLGDDVRPEGKRSKRGRGSSQHSIDHRVRKLSRSQQMMVDKTIENVDYARPDRRLLSRKQVDYQPWYNSKYKVDDKIELLCQDSGIRGCWFRCTVVQVSRKQIKVQYNDVQDEDGGGNLEEWIPAFKLAMSDKLGMRHSGRPAIRPAPTHEGKQEPVIEVGTAVDAWWSDGWWEGVVSGTGDGDDDNVQVYFPGEGLLRKVSKKDLRESRDWLGDRWVDIELKPNVASTIFAVNSSNTKFSVSPSTTKDVDSSGVVISCQDVPINEKSNELNDVAEDMNQVMDNKPTSQEETSTEVVETEQHGSCDNDNEDNHDNNEDNHDNDKDNKEENDGNDNKRVDNDVKDMEVLGTSEEDTKAVEPMEVAV 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1603 876 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 581 820 - -
Lele04g1603 876 SMART agenet_At_2 667 725 IPR014002 -
Lele04g1603 876 SMART agenet_At_2 580 645 IPR014002 -
Lele04g1603 876 CDD Cyt_b561_FRRS1_like 1 46 - -
Lele04g1603 876 Coils Coil 775 795 - -
Lele04g1603 876 MobiDBLite consensus disorder prediction 806 870 - -
Lele04g1603 876 Gene3D - 327 491 IPR043151 -
Lele04g1603 876 MobiDBLite consensus disorder prediction 515 540 - -
Lele04g1603 876 MobiDBLite consensus disorder prediction 795 876 - -
Lele04g1603 876 ProSiteProfiles BAH domain profile. 358 477 IPR001025 GO:0003682
Lele04g1603 876 SMART BAH_4 358 478 IPR001025 GO:0003682
Lele04g1603 876 Pfam Agenet domain 585 659 IPR008395 -
Lele04g1603 876 MobiDBLite consensus disorder prediction 504 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1603 Lele-ChrLele04 20926992 20933750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1603 594 723 PHD Transcription Factor Family AT5G58610 27.068 6.15e-10 61.2