Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1602 ATGGGGCCATCTAAAGTTTCAGTTTTTCCACTTTTGGTTTTCTGGGTATTTGTTCATCAGTTGAATTTAGCAGCAGGTCTCTCATCCTACGACTCCTACGATCAAAACAATGTCAGAAACTACATTAGCTGGAAGGATTTGTGGGTGGATGAACAAAGGTTGACCTGGGACCCCATTGAAGATGCCCGAGTTATTGTCGTTGACCAGCTTGGCAGAGGACATTCTAGAACTGTACAAGGAGCTGTAGATATGGTTCCTGATAACAACTCAGAAAGAATCAAAATTTACATATACCCTGGAATTTACAGAGAGAAAGTGTATGTGGCAAGAACGAAGGGGTATGTATCAATGATAGGAGGACAAGATGGAGCAGAGAGTGCAGTGATTACGTGGAATAGTAAATCATCGGACAGAGGTTTTGATGGACAAGAACTTGGGACCTATGCTTCTGCAACTGTGACTGTAGAATCTGATTATTTCTGTGCAACCAGGCTCACTTTTGAGAACTCGGTGGAGGCGGTGAATGGAGGAGATGGAATGCAAGGAGTGGCACTGAGGGTGGACAGTGAAAGGGCCATGTTTTATAGGGTGAGAATCAAAGGGGAACAAGACACTCTGTTGGACAACATAGGAACTCATTATTTCTATCAGTGTCAAATCCAAGGCAAAATTGATTTCATATTTGGCAATGCAAAATCACTCTATCAGAACTGTGCTATTCATTCAATAGCAGAGACATATGGAGCAATAGCAGCACATCACAGGAATGCAGAAGATGAAGAGACAGGCTTCTCCTTTGTAAATTGCTCAATCACAGGCACTGGCAGTGTCTTCCTTGGCAGAGCTTGGGGTGACTATTCTAGAATCATCTACTCTCTTTGTTATATGGATGACGTCATCATACCGCAAGGTTGGACTGACTGGAACCACCCTTCCAGAAAGATGACTGCTGAGTTTGGGGAGTACCAGTGTGAGGGAATGGGTGCAAATAGAAGAGGAAGGGTAGAATGGTCAAAATCTCTGAGCTATGAGGAAGCAAGGCCTTTTCTGGATAAGACTTTCATAAATGGGGACCAGTGGCTTATGCTATAG 1092 0.435 MGPSKVSVFPLLVFWVFVHQLNLAAGLSSYDSYDQNNVRNYISWKDLWVDEQRLTWDPIEDARVIVVDQLGRGHSRTVQGAVDMVPDNNSERIKIYIYPGIYREKVYVARTKGYVSMIGGQDGAESAVITWNSKSSDRGFDGQELGTYASATVTVESDYFCATRLTFENSVEAVNGGDGMQGVALRVDSERAMFYRVRIKGEQDTLLDNIGTHYFYQCQIQGKIDFIFGNAKSLYQNCAIHSIAETYGAIAAHHRNAEDEETGFSFVNCSITGTGSVFLGRAWGDYSRIIYSLCYMDDVIIPQGWTDWNHPSRKMTAEFGEYQCEGMGANRRGRVEWSKSLSYEEARPFLDKTFINGDQWLML 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1602 363 SUPERFAMILY Pectin lyase-like 62 361 IPR011050 -
Lele04g1602 363 Pfam Pectinesterase 65 358 IPR000070 GO:0030599|GO:0042545
Lele04g1602 363 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 60 361 - -
Lele04g1602 363 Gene3D - 63 363 IPR012334 -
Lele04g1602 363 FunFam Pectinesterase 60 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1602 Lele-ChrLele04 20924199 20926140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1602 5 314 Carbohydrate Esterase AT5G55590 54.079 1.81e-123 357