Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1584 ATGTTCGATCTGTTGAGCGCAGCAGAGAACCCTGCTGGACAAGGCGGAGCTCCGGCGAACCCGAACGAGAATCAGCCGCAGCAGCAGCAGCCTGCGCAGCGCGTGATGACGAGAGAACAGGACCAGTACATGCCGATCGCGAACGTCATCAGAATCATGCGTCGGATCCTTCCGGCGCACGCTAAGATCTCCGATGAAGCCAAAGAGACTGTCCAGGAGTGCGTCTCTGAGTATATCAGCTTCATTACGAGCGAGGCGAACCAGCGGTGCCGTCAGGAGCAGCGCAAGACGGTAACGGCTGATGACTTGCTATGGGCCATGGAGAAGCTGGGCTTTGACAACTACGTGGGGCCTCTCTCTCTTTACCTGCACCGTTACCGTAATGGTGAGGGTAGTTCCGGTGGCCACTATGTCCCACGGGTACAGCCGCCGCAAGTGCTGGCTCCTCCAGAGCTCGCACCAGCAATGCCACCACTTCCGCCGCCATCGTACTATTACGGGTCGGGTTATAATTATCCAGGGGCGCCGAATCAGATGGGGCTGTCGGGTGCTGGCAGCTCAAGCAGTGGTGGTGGTGCTCCCGCGTATTATGATCCGTATGCTCATCTGAGGAATGACCGTTTCTGA 627 0.5789 MFDLLSAAENPAGQGGAPANPNENQPQQQQPAQRVMTREQDQYMPIANVIRIMRRILPAHAKISDEAKETVQECVSEYISFITSEANQRCRQEQRKTVTADDLLWAMEKLGFDNYVGPLSLYLHRYRNGEGSSGGHYVPRVQPPQVLAPPELAPAMPPLPPPSYYYGSGYNYPGAPNQMGLSGAGSSSSGGGAPAYYDPYAHLRNDRF 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1584 208 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Lele04g1584 208 PRINTS CCAAT-binding transcription factor subunit A signature 109 127 - -
Lele04g1584 208 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Lele04g1584 208 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 44 107 IPR003958 -
Lele04g1584 208 MobiDBLite consensus disorder prediction 1 37 - -
Lele04g1584 208 MobiDBLite consensus disorder prediction 17 37 - -
Lele04g1584 208 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 21 133 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lele04g1584 208 SUPERFAMILY Histone-fold 40 135 IPR009072 GO:0046982
Lele04g1584 208 FunFam Nuclear transcription factor Y subunit B-6 32 143 - -
Lele04g1584 208 Gene3D Histone, subunit A 31 135 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1584 Lele-ChrLele04 20696226 20696852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1584 21 134 CCAAT-HAP3 Transcription Factor Family AT5G47670 68.966 6.65e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele04g1584 CBFD_NFYB_HMF 2.1e-24 CL0012