Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1568 ATGGAAATCAGAAGAGAGGATGATGAAGGTGATTCTCAGGAGGTTTCTCTGCAGAATATTGCAGCAGCAAGCAATGGCTTTGGTCACAGCATAGAGTTGATGTCTCAGCCCAATTACCTTTCCAATAATAATAACAACAGGTTCTCTGATATTGATATTGTTATTGACCATTCCTCTCTAAACCGTGATCGTCCTGTCCCCATATTTCTCAAGTTTGAGGATGTAGAGTACAAGGTGAGGAACAGCCATGCAGTGTCCAACCTGAGGAAAACGGTGTCAAAGGTGGCCACACAAGTCAGTGAAAGCCAAGAGAGATACAAGAAAATCTTGAAGGGTATAACTGGAAGTATAGGTCCTGGTGAGATCCTTGCTCTCATGGGTCCTTCTGGTAGTGGCAAGACAACCTTGTTGAAAGTCATAGGAGGAAGATTATCTGACAATGTCAAGGGAAAAGTTACTTACAATGATGTTGAATACAGTTCTGCTATCAAGACAAGGATTGGATTTGTGACACAAGATGATGTTCTGTTCCCACAACTAACAGTGGAAGAAACATTAGTCTTCTCTGCATTCTTAAGGTTGCCATCCAACATGAGCCGAGAACAAAAGCATCAGAGAGTGGAGGCAACTGTACAGGATCTAGGCCTTGAAAGATGTCGGCATACAAAAATAGGAGGAGGATTCATTAAAGGCATATCAGGAGGGGAAAGGAAGAGAACCAGCATAGGGCATGAGATTCTTGTGGATCCGTCGCTGCTTCTACTTGATGAGCCAACTTCAGGCCTTGATTCCTCTTCAGCAAACAGGCTCCTTCTCACTCTTCATGGACTTGCCAAGTCTGGAAGGACAATAATCACAACAATTCATCAGCCATCCAGCAGGATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTACCCAATTTATTATGGGAAGGCTAGAGATTCAATGGACTATTTCTCATCCTTGAGGTTCATCCCAGACATACCCATGAATCCTGCAGAGTTCTTGCTTGACTTGGCCACTGGACAAGTGAATGACATCAGCATTCCAGAAGACGTTTTTGAACATCAAGAATCCGCTGACACTCCTAAAGCTGTCATAAAACATCTACAACTTAAGTACAAGAGTTTACTGGAGCCAAAGGAGAAAGAAGACAACCATGGAGTAATGAAGGCACCAGAACATCTACAAGTTGCCATTCAAGCTAAGAAGGAGTGGACATTGAGTTGGATAGACCAGTTCATGGTTCTGTCAAAGAGAACATTCATAGCAAGATACAAAGACTACTTTGATAAGGTCAGACTAATTCAAGCAGTTGGAGTTGCACTCTTGCTTGGCCTTCTTTGGTGGAAATCTTCAATTCATACAGAGGCTCAACTCAGAGATCAGGTGGGGTTAATGTTCTATATCTGTATATTCTGGACATCTTCATGTATCTTTGGAGCAGTGTATGTGTTCCCATTTGAGAAGATATATTTGGTGAAAGAAAGGAAAGCAGACATGTACAGATTAAGCGTATACTACGCATGCAGCACTCTGTGTGATATGATAGCTCATGTGTTCTACCCTACTTTTTTTATGCTTATCTTGTACTTCATGGCTGGCTTCAAGAGAACCCTCACTGCCTTCTCTCTCACACTACTCTCTGTGCTTCTCATAGCCATTACCAGTCAAGGAGCAGGAGAACTATTTGGAGCTGCAATTATGAGTATTCAAAGAGCTGGCATGATTGCTTCTTTGATCCTAATGCTATTCCTTCTAACTGGTGGCTACTATGTCCAGCACATACCAGTATTCATGAGGTGGTTGAAGTATTTGTCGTTCATGTTCTATGGGTTCAGGCTTCTGCTAAAAGTGCAGTACTCAGGAGATGAACTGTATGAGTGTGAAAGCGTTGGAGGGTGCAGGGCTCTGCAGAGCTCTCCTTCATTCGACACTGTAAACTTGGAAGGAGGTTTGAAAGAAGTTTGGGTTCTTCTTGCCATGGCTCTCATCTTTCGTCTCTTTGCTTACTTGTGCCTCCGCATCAGAATTGATTCCTCCAACCTCTGA 2064 0.4278 MEIRREDDEGDSQEVSLQNIAAASNGFGHSIELMSQPNYLSNNNNNRFSDIDIVIDHSSLNRDRPVPIFLKFEDVEYKVRNSHAVSNLRKTVSKVATQVSESQERYKKILKGITGSIGPGEILALMGPSGSGKTTLLKVIGGRLSDNVKGKVTYNDVEYSSAIKTRIGFVTQDDVLFPQLTVEETLVFSAFLRLPSNMSREQKHQRVEATVQDLGLERCRHTKIGGGFIKGISGGERKRTSIGHEILVDPSLLLLDEPTSGLDSSSANRLLLTLHGLAKSGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKARDSMDYFSSLRFIPDIPMNPAEFLLDLATGQVNDISIPEDVFEHQESADTPKAVIKHLQLKYKSLLEPKEKEDNHGVMKAPEHLQVAIQAKKEWTLSWIDQFMVLSKRTFIARYKDYFDKVRLIQAVGVALLLGLLWWKSSIHTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKIYLVKERKADMYRLSVYYACSTLCDMIAHVFYPTFFMLILYFMAGFKRTLTAFSLTLLSVLLIAITSQGAGELFGAAIMSIQRAGMIASLILMLFLLTGGYYVQHIPVFMRWLKYLSFMFYGFRLLLKVQYSGDELYECESVGGCRALQSSPSFDTVNLEGGLKEVWVLLAMALIFRLFAYLCLRIRIDSSNL 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1568 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 325 IPR027417 -
Lele04g1568 687 Pfam ABC transporter 110 260 IPR003439 GO:0005524
Lele04g1568 687 CDD ABCG_EPDR 84 314 - -
Lele04g1568 687 Gene3D - 87 326 IPR027417 -
Lele04g1568 687 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 49 675 - -
Lele04g1568 687 SMART AAA_5 119 310 IPR003593 -
Lele04g1568 687 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 332 IPR003439 GO:0005524
Lele04g1568 687 FunFam ABC transporter G family member 22 97 326 - -
Lele04g1568 687 Pfam ABC-2 type transporter 417 625 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1568 Lele-ChrLele04 20561543 20565543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1568 108 293 Calmodulin-binding Proteins AT2G36910 29.843 2.78e-11 65.1