Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1541 ATGGGCTCTCTAAATGAAAGACCAGTTCAGGAGATCGAAAACGAGAGTCCTCATATCCCAGAAATATCTGATCAGAAGTCAGAATCTACCATGAAAGCTGAACAAGGATCATGTTCTGGAGAATTCTATGCCACACATCAGAAAGCACTAAGGAGTATTGTCTCCAACAGTATAAAAATTGTAATTTTCTCAAATCGACTCAACTTGCTTATGCCTCTTGGCCCGTTGGCAATTATTGTGGAGAGATTGACTAATCGTCACGGTTGGGTCTTCACTCTGAGCTTGTTGGGTATAATGCCTTTGACTGAGCGGCTTGGTTTTGCTACAGAGCAGCTGGCGTTTTACTCTGGAGACACTGGTAATGATTTTAACATTGGGGGTCTTCTAAATGCCACTTTTGGAAATGCAACAGAACTTATCATCTCTATATGTGCATTGAAAAAGAGGAATGACACGAGTTGTCCAACTCTCATTGCTGGGCTCAATTTTGTCCAACATGCAACTGCTACAGTGAATGCAGGATTGTTATTGATGGCAGTCATGGGCCTACTTTTTCTTGCTGTTCTTCACTACACACGCACTGAGGAGGAGTGGAATCATGGAAACTGCTTAGAAGATGATGAATCTCCTGATATCTCTAAATGGGAATCAGTAATCTGGCTTTCAATTATGACTGCTTTGATATCAATTCTGTTAGAATATTTAGTTGGTGCTATAGAGGGAGCATCAACTTCATGGAAAATGCCAGTGTCTTTTATCAGTGTAATATTGCTTCCCATAGTGGGAAATGCTGCAGAGCATGCCAGTGCTATCATGTTTGCCATGAAAGATAAGCTTGAGATTTCCTTAGGAGTAGCAATAGGTTCCTTCACACAGATATCTATGTTTGTGATACCACTTTGCGTGATTATTGGGTGGATAATGGGGCATCCAATGGACTTAAACTTTCAACTTTTTGAGACGGCAACGCTGTTTCTAACTGTTATTGTCGTAGTCCTTTTGTTGCAGATCAGTCAGTGGACATTGGCCAAAAAGAAACAGTCAAAGGTTATGTTATCTTGTCCTATTGTAAATTTATATCAAAGAGAAGCAAACAATCTTTTTGAAGAAATGAGTACTGAAGATGTCATCGGTCAACAAAGACCCTTCATCGAAGCCTCATCTTCCTCTCGCAATGTGATTCAAGAGCCTCCTCGTAGAACAGGGAACTTTGTGAGTGCAGTGGCACATATAATAACAGGGGTGATAGGAGCAGGAGTGCTTTCTGTGGCATGGAGCATTGCTCAGCTTGGCTGGATTGCAGGTCCTCTCTGCACTCTTGTCTTTGCAGCCACCACCCTTCTTTCCTCCTTCCTCCTCTCTGATTTCTACAGGTTCCCTCATCCGCATGGCACCGTCCGTAACCCGACCTTCATGCATGCCGTCAAGCTCTACTTAGGAGAGAAAAGGGAGAAGGTTTGTAGAGTGCTTGTGGAAATCTATAGGATTGGTACGGCTACTGCCTACGTTATTACTTCTGCTTCCAGCGCCAGGTATTCTTCTTCTACTTATTTTCTTGTCAATAATGTTGCCCCTATTTCATTTGATTTCATGTGGGCCGGGCCGGGCTCTTGA 1614 0.4275 MGSLNERPVQEIENESPHIPEISDQKSESTMKAEQGSCSGEFYATHQKALRSIVSNSIKIVIFSNRLNLLMPLGPLAIIVERLTNRHGWVFTLSLLGIMPLTERLGFATEQLAFYSGDTGNDFNIGGLLNATFGNATELIISICALKKRNDTSCPTLIAGLNFVQHATATVNAGLLLMAVMGLLFLAVLHYTRTEEEWNHGNCLEDDESPDISKWESVIWLSIMTALISILLEYLVGAIEGASTSWKMPVSFISVILLPIVGNAAEHASAIMFAMKDKLEISLGVAIGSFTQISMFVIPLCVIIGWIMGHPMDLNFQLFETATLFLTVIVVVLLLQISQWTLAKKKQSKVMLSCPIVNLYQREANNLFEEMSTEDVIGQQRPFIEASSSSRNVIQEPPRRTGNFVSAVAHIITGVIGAGVLSVAWSIAQLGWIAGPLCTLVFAATTLLSSFLLSDFYRFPHPHGTVRNPTFMHAVKLYLGEKREKVCRVLVEIYRIGTATAYVITSASSARYSSSTYFLVNNVAPISFDFMWAGPGS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1541 537 Pfam Sodium/calcium exchanger protein 218 338 IPR004837 GO:0016020|GO:0055085
Lele04g1541 537 Pfam Transmembrane amino acid transporter protein 401 516 IPR013057 -
Lele04g1541 537 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 205 339 IPR004713 GO:0006812|GO:0008324|GO:0016020
Lele04g1541 537 MobiDBLite consensus disorder prediction 1 34 - -
Lele04g1541 537 MobiDBLite consensus disorder prediction 11 28 - -
Lele04g1541 537 Gene3D - 121 360 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1541 Lele-ChrLele04 20392962 20398110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1541 1 336 Antiporters AT1G55730 51.990 5.77e-118 353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1541 04 20392962 20398110 Lele04g1541 04 20392962 20398110 ECH
Lele02g1552 02 19539790 19544359 Lele04g1541 04 20392962 20398110 hybridization