Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1523 ATGGAGTTAACCCCAAGAGGAAGAACCCAGCACTCTCCTTTGACTTTGAGCTTTGACAGAGATCCTGACTCTGTTTTGGAGCAAGAGAGAGAGATTCTGTCGAAATGGGCTGCCATAGAAAAACTACCCACTTTCAAGAGGATCAGAACTTCGTTTATTGATGTGATTGAAGATGATGGTGTACAAACCACCACCACCAGCAGCGTTAATTTAAAATCAGAGAGTAGAAGACAATTGAGATCAGACAGCAAAAGGGTCGTTGATGTTACTAAACTTGGAGCAGTTGAAAGGCGTTTGTTGATTGACAAGCTCATAAAGCACATTGAGAATGATAATCTCCAGTTGCTGCAGAAACTACGAGAAAGGATAGAGAGAGTGAAGGTGAAGATTCCTACTGTGGAGGTCAGGTACAAGAACCTGCATGTAGAAGCAGAATGTGAGGTTGTACAGGGGAAGCCACTTCCTACACTGTGGAACTCTATTGTTAGCTTCTTTTCAGGTTTTACGAAGGCAGTGCCTTGTACTTCTCAAGGAGCCAACGTAAGCATTCTTAAGGATGTAAGTGGCGTCATAAAGCCATCAAGGCTTACACTTCTGCTTGGCCCACCTGGAAGTGGGAAAACGACCTTGCTATTGGCACTGGCTGGAAAACTTGAGCAATCTCTCAAGGTGAAAGGAGAAATCTCTTACAATGGTCACATGCTAGATGAATTTTTTCCTCAAAAAACATCATCGTATATAAGCCAGTATGACCTGCACATACCTGAGATGACAGTGAGGGAAACAATTGACTTTTCAGCCCAATGCCAGGGAGTTGGCGACAGAGTTGATATACTGGCTGAAGTCACAACGAGAGAGAAAGATGAAGGAATCATTCCTGACCCAGATATTGATGCCTATATGAAGGCAATATCAGTTGAAGGACAAGAAGAAAATCTACAAACTGATTATGTTTTGAAGATTCTTGGGCTTGATATCTGTGCTGACACAATGGTTGGTGATGCATTAGATAGAGGCATTTCAGGTGGACAGAAGAAAAGGCTTACAACAGGAGAGATGATTGTTGGTCCCATAAAAACTCTTTTTATGGATGAAATATCAACTGGCTTGGACAGCTCCACGACTTTTCAAATAATTACCTGTCTCCAGCAGTTGGTGCACATCACAGATGCAACAGCAGTGGTTTCACTTCTTCAGCCAGCTCCTGAAACCTTTGAATTATTTGATGATCTTATACTGATAGCAGAGGGAAAGATTGTATATCATGGCCCGTGCAGTCAAGCGCTTCAATTTTTTGAGGAATGTGGTTTCAAGTGTCCTGAAAGGAAAGGAGTAGCAGACTTTCTTCAGGAAGTAACATCTAAGAAGGATCAAGGACAGTACTGGTATCGTACAGACAATCCTTACACCTATGTTTCAGTGGATCGGTTCTCTCAAATGTTCAAAAAAAGTTATTGGGGACAAAGTTTAAACGATGAGATCTCAAAGCTATATGATAAATCTCAATCCCACAAAAATGCTTTATCATTTAGCAAGTACTCATTGGGCAAATGGAAATTGTTCAAAGCTTGCATGAGGAGGGAGATACTTCTTATGAAACGAAACTCTTTTATCTATGTATTCAAAACTGCACAGCTGACAATCACAGCAATCATAACAATGACAGTATTTATACGCACTGAGTTGAATGTAGACATAAAGAGTGCAAACTTTTTACTGGGCTCATTGTACTACACACTTGTCCGCCTCATGACTAATGGGGTTGCTGAGCTGATCTTGACTATTACTAGACTTCCTGTTATTTACAAGCAGAAGGAATTCTATCTATATCCAGCATGGGCTTACTGTCTTCCAGCTTCCATTCTAAAGATCCCATTTTCAGTTATTGATGCAATTGTCTGGACTTCAGTAACTTATTACGTTATAGGCTACAGCCCTGAAGTAGAAAGGTTCTTCCGTCAGTTTCTTCTACTTTTCAGTCTGCATTTGTCATCAACATCTTTATGCCGTTTCCTTGCCTCAGTTTTCCAAACTGATGTTGCCGCTACAACAGTTGGTTTCTTGTTCTTAGTACTGATGTTTTTGTTTGGAGGCTTCATTCTTCCTGAACCTTCATTACCATCGTGGTTGAGGTGGGGTTTTTGGCTCTCACCCATGACATATGGAGAAATTGGATTAACAATAAATGAATTTCTTGCTCCCCGCTGGCAGAAGATTCAAGAGGGAGGCATCACCCTAGGGAGGCAGGTTTTGATTAGTCATGGTTTAGACTTCAATGCAAGCTTCTACTGGCTATCAATTGGGGCATTGCTTGGTTTCACAGTACTTTTTGACTTTGGATTTATCTTAGCATTAAGTTACTTAAAACCTCCAAAGATGTCTCGAGCTCTTGTTTCCAAAGACAAGGCCCCTCAACTACAAGGAGGAGAAAATGGCAAGAGTGTGGAACTAGAAAATAGATCAGTTGCAGTTGACATTAGCCAGACCTCAAAGGAAGCACAAAACACAGGAAAAATGGTCCTGCCCTTTCAACCTCTGACAATAGTATTCAAGGATGTCCAGTATTTTGTCGACACCCCTCCAGAAATGAAAAGGCATGGGTCCAGTGAGAAAAAACTTCAATTGCTCCGTGATATCACTGGAGCATTTAGGCCAGGAGTTCTCACAGCACTGATGGGAGTGAGTGGGGCAGGGAAAACAACTCTTATGGATGTCCTTTCAGGTAGAAAAACTGGAGGTATCATTGAAGGAGATATAAGAATTGAAGGATACCCCAAAATGCAGAAGACATTTGCAAGAGTTTCAGGTTACTGTGAGCAGGTTGACATACATTCCCCTTATATAACAGTTGAAGAATCTGTAAAATACTCAGCATGGTTGCGGTTGCCAATGGAGATTGATTCAGTCACAAAAGGGAAATTTGTAGAAGAAGTCATTGAAACTATTGAACTTGATGATATAAAGGATCGTTTAGTTGGCATAGCTGGCCAAAGCGGCTTATCAACTGAACAGCGTAAAAGACTTACCATTGCGGTGGAGCTTGTTTCCAATCCATCAATAATCTTTATGGATGAACCAACATCAGGTTTGGATGCCCGAGCAGCTGCCATAGTTATGCGTGCAGTGAAGAATGTGGTCACCACGGGCAGGACCACGGTTTGCACCATACACCAACCAAGCATTGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAATCAGGAGGACAGATTATGTATAATGGAAAACTCGGTCACCAGTCGAGTAGACTGATTGAATACTTTCAGAGTATACCAGGAGTGCCAATGATCAAAGACAATTATAATCCTGCAACCTGGATGCTTGAAGCTACCTCTGCATCTGTAGAAGCAGAACTTAAAGTAGACTTTGCAAAAATCTATAAGGAGTCACCTCTTTACCGGAACACCCTTGAAATGGTACAAGAGTTAAGTGAACCATCTCCAGGTTCAAAGGATTTACAATTCTCAACCCGTTTTCCACAAAGTAACTTGGGGCAGTTTACAGCATGTCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAGTACAACTTGACACGTTTTCTGTTCATGGTTGTTGCAGCAGTAGTATTTGGGGCAGTATTTTGGCAGAAAGGGAAGGAAATAAACAATGAGCAGGATTTGTTCAACATACTTGGATCGATGTATATTGCCGTAATATTCTTGGGCATAAATAACTGTTCATCAATTTTACCATATGTGGTAACTGAGCGCTCTGTCCTGTACCGTGAAAAATTTGCTGGAATGTATTCTTCCATGGCCTACTCATTTGCACAGGTGACCATTGAGATACCATATATCTTAGTGCAAGCTATTGTGTATGTGGCTATCACTTATCCAATGATTGGTTACTATTGGTCGGTTGAGAAGGTCTTTTGGTACTTCTACACCACATTCTGTACTTTTTTGTACTTCGTATATCTTGGAATGTTGATAGTTTCGTTGAGCTTGAATCTCGATTTAGCTTCCATACTAGCAGCTGCAGTCTACACCATATTCAATATTTTCTCTGGATTCCTCATGCCTGGCCCGAAAATTCCTAAATGGTGGGTTTGGTGTTATTGGCTTTGCCCCACATCTTGGTCTCTAAATGGCCTCCTGACTTCACAATATGGGGACATAGACAAGGAGATAACCATATTTGGGAATTCAAAACCAGTTGCAGTTGGTACCTTTCTGAAAGACTATTATGGGTTCCATCACGATCGGTTGAGCATTGTGGCTGTGGTTCTCATCGCTTTCCCAATTGTTTATGCATCCCTATTTGCCTATTGCATAGGGAAATTGAATTTCCAGAAAAGGTAG 4353 0.4121 MELTPRGRTQHSPLTLSFDRDPDSVLEQEREILSKWAAIEKLPTFKRIRTSFIDVIEDDGVQTTTTSSVNLKSESRRQLRSDSKRVVDVTKLGAVERRLLIDKLIKHIENDNLQLLQKLRERIERVKVKIPTVEVRYKNLHVEAECEVVQGKPLPTLWNSIVSFFSGFTKAVPCTSQGANVSILKDVSGVIKPSRLTLLLGPPGSGKTTLLLALAGKLEQSLKVKGEISYNGHMLDEFFPQKTSSYISQYDLHIPEMTVRETIDFSAQCQGVGDRVDILAEVTTREKDEGIIPDPDIDAYMKAISVEGQEENLQTDYVLKILGLDICADTMVGDALDRGISGGQKKRLTTGEMIVGPIKTLFMDEISTGLDSSTTFQIITCLQQLVHITDATAVVSLLQPAPETFELFDDLILIAEGKIVYHGPCSQALQFFEECGFKCPERKGVADFLQEVTSKKDQGQYWYRTDNPYTYVSVDRFSQMFKKSYWGQSLNDEISKLYDKSQSHKNALSFSKYSLGKWKLFKACMRREILLMKRNSFIYVFKTAQLTITAIITMTVFIRTELNVDIKSANFLLGSLYYTLVRLMTNGVAELILTITRLPVIYKQKEFYLYPAWAYCLPASILKIPFSVIDAIVWTSVTYYVIGYSPEVERFFRQFLLLFSLHLSSTSLCRFLASVFQTDVAATTVGFLFLVLMFLFGGFILPEPSLPSWLRWGFWLSPMTYGEIGLTINEFLAPRWQKIQEGGITLGRQVLISHGLDFNASFYWLSIGALLGFTVLFDFGFILALSYLKPPKMSRALVSKDKAPQLQGGENGKSVELENRSVAVDISQTSKEAQNTGKMVLPFQPLTIVFKDVQYFVDTPPEMKRHGSSEKKLQLLRDITGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIEGYPKMQKTFARVSGYCEQVDIHSPYITVEESVKYSAWLRLPMEIDSVTKGKFVEEVIETIELDDIKDRLVGIAGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAIVMRAVKNVVTTGRTTVCTIHQPSIDIFETFDELILMKSGGQIMYNGKLGHQSSRLIEYFQSIPGVPMIKDNYNPATWMLEATSASVEAELKVDFAKIYKESPLYRNTLEMVQELSEPSPGSKDLQFSTRFPQSNLGQFTACLWKQHLSYWRSPEYNLTRFLFMVVAAVVFGAVFWQKGKEINNEQDLFNILGSMYIAVIFLGINNCSSILPYVVTERSVLYREKFAGMYSSMAYSFAQVTIEIPYILVQAIVYVAITYPMIGYYWSVEKVFWYFYTTFCTFLYFVYLGMLIVSLSLNLDLASILAAAVYTIFNIFSGFLMPGPKIPKWWVWCYWLCPTSWSLNGLLTSQYGDIDKEITIFGNSKPVAVGTFLKDYYGFHHDRLSIVAVVLIAFPIVYASLFAYCIGKLNFQKR 1450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1523 1450 Pfam Plant PDR ABC transporter associated 736 798 IPR013581 -
Lele04g1523 1450 Pfam ABC-2 type transporter 399 450 IPR043926 GO:0140359
Lele04g1523 1450 Pfam ABC-2 type transporter 1057 1128 IPR043926 GO:0140359
Lele04g1523 1450 Pfam ABC transporter 184 366 IPR003439 GO:0005524
Lele04g1523 1450 Pfam ABC-transporter N-terminal 100 159 IPR029481 -
Lele04g1523 1450 MobiDBLite consensus disorder prediction 1 20 - -
Lele04g1523 1450 FunFam ABC transporter G family member 34 172 475 - -
Lele04g1523 1450 CDD ABCG_PDR_domain2 845 1083 IPR034003 -
Lele04g1523 1450 Pfam ABC transporter 876 1028 IPR003439 GO:0005524
Lele04g1523 1450 SMART AAA_5 193 426 IPR003593 -
Lele04g1523 1450 SMART AAA_5 885 1077 IPR003593 -
Lele04g1523 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 848 1101 IPR003439 GO:0005524
Lele04g1523 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 163 441 IPR003439 GO:0005524
Lele04g1523 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 871 1083 IPR027417 -
Lele04g1523 1450 Pfam ABC-2 type transporter 1174 1386 IPR013525 GO:0016020|GO:0140359
Lele04g1523 1450 Pfam ABC-2 type transporter 520 731 IPR013525 GO:0016020|GO:0140359
Lele04g1523 1450 Gene3D - 863 1095 IPR027417 -
Lele04g1523 1450 FunFam ABC transporter G family member 34 862 1094 - -
Lele04g1523 1450 Gene3D - 165 473 IPR027417 -
Lele04g1523 1450 Coils Coil 116 136 - -
Lele04g1523 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 440 IPR027417 -
Lele04g1523 1450 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 26 1450 - -
Lele04g1523 1450 CDD ABCG_PDR_domain1 183 423 IPR034001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1523 Lele-ChrLele04 20252951 20261208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1523 869 1060 Calmodulin-binding Proteins AT2G36910 27.751 2.52e-07 53.9