Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1496 ATGGCAACTTTTGTTGGTTTCTTGGCTAAGTTCGTCTCTCTTTTCATCCTCTTTGTCCACCTCGGCTGCTTTATTTTCTCCACCGCCGCCGGCTCCTGCGGTGACGGCGGAGAACAAGGTGCCCGAAAGTCTTCGCCAAAGAAACGCAAGGTATCCCCTGTTTTGCAGTCGCAGCATTCTTCTCCTTCCCATCCCAAGTTCAAAACCCGTAAGGCTATTTCTTCTTCTTGGACTTTCATCAAGCACCTTTTCTCCCACAAATCTTGCAAAACCAGTGACGTTGTTCAGGGATCGCCGCAATCATCCGCCTCCGCTGCTATTTCTGCTGGTTCCGCCGTCTCCGCCGCACTGCCTTCTTTGACATCCACCAGATCCTCCCAGCAGTCGTTGGTCTCTCTGGAGCAGGCCGAATCGCATTCGCTGGATCCTCCTGGGAAAAAACCATGTGCGTCGTGCCCTGAATCCGATATCGCCGCAGATAACAACCACTTCTTCCCCCTCCGCAATGACATCTTCCCCTGCACCGCCTGCGGCGAGGTTTTCCAGAAACTACAAGTTCTCGAACAGCATCAATCTCTCAAGCACGCCGTGTCGGAGCTGGTGGAGACCGACGCTGGACATAACATAGTACGGATAATATTCAAGTCGGGTTGGACCAACACACAGAAATGCCCCAGAATAAGTCGGATCCTGAAGATCCATAACAGCACGAAGATCCTCTCCAAGTTCGAAGAATACAGAGAGACAGTGAAGGCAAAGGCCGCCCGAAACGGCACCGTAAAGAAGCGCGACGAAAGATGCATAGCGGACGGCAACGAGCTCATGAGATTCCACTGTTCCACATTCCTCTGCGACTTAGGACTCAACGGTAATTCCGGCATTTGTGGCCAGCAATATTGTAATATCTGCGGGATCATCAAATCGGGGTTCTCACCCAAGTTGGACGGAATCTCCACGCTATCGACGAGCTGGAGAGCGCACGTGGCCATCCCGGAGGAGGTGGAGGAGGAGTTCAAGTTCATGAACGTGAAACGGGCCATGCTGGTATGCCGGGTCATAGCGGGTCGGATCGGCACTGACTCGGAAGAGGCCGACAAAGAGGACGGCGGTTTTGATTCGGTGATGGCGCGAGGAGGAAGCGGAGTTTACACCCGGATGGACGAAGAAGAGCTACTGGTGTTCAATCCTAGGGCTGTGCTCCCATGCTTTGTGATTGTGTATAGCGGCGAAAGGCAACGGCTGGTTCTTGTATCAGTTGATTGTTATTGTTAG 1272 0.5283 MATFVGFLAKFVSLFILFVHLGCFIFSTAAGSCGDGGEQGARKSSPKKRKVSPVLQSQHSSPSHPKFKTRKAISSSWTFIKHLFSHKSCKTSDVVQGSPQSSASAAISAGSAVSAALPSLTSTRSSQQSLVSLEQAESHSLDPPGKKPCASCPESDIAADNNHFFPLRNDIFPCTACGEVFQKLQVLEQHQSLKHAVSELVETDAGHNIVRIIFKSGWTNTQKCPRISRILKIHNSTKILSKFEEYRETVKAKAARNGTVKKRDERCIADGNELMRFHCSTFLCDLGLNGNSGICGQQYCNICGIIKSGFSPKLDGISTLSTSWRAHVAIPEEVEEEFKFMNVKRAMLVCRVIAGRIGTDSEEADKEDGGFDSVMARGGSGVYTRMDEEELLVFNPRAVLPCFVIVYSGERQRLVLVSVDCYC 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1496 423 SUPERFAMILY ADP-ribosylation 197 409 - -
Lele04g1496 423 Gene3D - 196 408 - -
Lele04g1496 423 MobiDBLite consensus disorder prediction 50 69 - -
Lele04g1496 423 MobiDBLite consensus disorder prediction 33 69 - -
Lele04g1496 423 MobiDBLite consensus disorder prediction 128 153 - -
Lele04g1496 423 ProSitePatterns Zinc finger C2H2 type domain signature. 174 195 IPR013087 -
Lele04g1496 423 ProSiteProfiles Zinc finger C2H2 type domain profile. 172 200 IPR013087 -
Lele04g1496 423 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 75 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1496 Lele-ChrLele04 20087304 20088715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1496 77 408 C2H2 Transcription Factor Family AT2G29660 53.509 6.49e-108 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele04g1496 None None None