Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele04g1487 | ATGGGGAAGTCAGCGTTTCATGATTCTCTCAAAGCTCTGGAAGCTGATATTCAGTACGCCAATGCTCTTTTATTAGGGTATCCCAGGGATAAAGATGGAGCATGCTTTCAAATGAGACTGTCATACGGTCCAGGTGCTACCTTATTTCTTTTTCTTGTTCAGTGGGCGGATTACCACCTGGCTGGTGCTCTGGGTTTGCTGAGAGTTCTAATTTATATGACCTATGGAGATGGGAAGACCACCATGTCAATATATGAAAGGAAAGCAAGCATTAAAGAGTTTAACTCGGTGATATTTCCTGCTTTATTGCAACTTGAGAAAGGCATCACAGATTTGGAGGAAAAGAAACAAAATGAAGTATATGCTATCAGATATAAGAAGAAAGAAAAGCAATCAAAATTTGACATGGAAAGAGAAGAGGAATGTGGAATTTGCATGGAGGTGAAGGCAAAAGTTGTGCTGCCTAATTGCTGCCATTGCATGTGTTTGAAGTGCTTCAGGGACTGGTGTGAGAGATCCGAGTCATGCCCGTTTTGCCGGGGAAATCTTAAAAGGGTCAACTCAGGTGACCTTTGGAATTACATAGATGATGGTGAGGCCATGGATCTCAGAACGATTTTCAAAGAAAACCTTAAGAGGCTGCATTTGTACATAGAGAAGTTGCCTATTGTCGATCCGGACCCCATGTATGTCTCTTATGAACCTTGTAGGAGTTAA | 717 | 0.4184 | MGKSAFHDSLKALEADIQYANALLLGYPRDKDGACFQMRLSYGPGATLFLFLVQWADYHLAGALGLLRVLIYMTYGDGKTTMSIYERKASIKEFNSVIFPALLQLEKGITDLEEKKQNEVYAIRYKKKEKQSKFDMEREEECGICMEVKAKVVLPNCCHCMCLKCFRDWCERSESCPFCRGNLKRVNSGDLWNYIDDGEAMDLRTIFKENLKRLHLYIEKLPIVDPDPMYVSYEPCRS | 238 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele04g1487 | 238 | FunFam | RING/U-box superfamily protein | 123 | 189 | - | - | |
Lele04g1487 | 238 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 109 | 190 | IPR013083 | - | |
Lele04g1487 | 238 | SUPERFAMILY | RING/U-box | 130 | 185 | - | - | |
Lele04g1487 | 238 | ProSiteProfiles | Zinc finger RING-type profile. | 142 | 180 | IPR001841 | - | |
Lele04g1487 | 238 | Pfam | Ring finger domain | 141 | 180 | IPR001841 | - | |
Lele04g1487 | 238 | PANTHER | RING FINGER PROTEIN 41, 151 | 4 | 227 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele04g1487 | Lele-ChrLele04 | 20037622 | 20039770 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele04g1487 | 82 | 183 | C3H Transcription Factor Family | AT1G04360 | 24.107 | 1.83e-06 | 46.2 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele04g1487 | 04 | 20037622 | 20039770 | Lele04g1487 | 04 | 20037622 | 20039770 | ECH | |
Lele01g1233 | 01 | 7463545 | 7465504 | Lele04g1487 | 04 | 20037622 | 20039770 | hybridization | |
Lele02g1503 | 02 | 19192850 | 19194987 | Lele04g1487 | 04 | 20037622 | 20039770 | hybridization |