Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1484 ATGGAAGATGACATAGAGAAGAAAGGGGAGGGAAGTGGGAAGAAGGATATGGTGATGGAGAGGAAGAAGTCGGATCTAATAGTGACGATACAGAGAGAGAATAGCAATGGCGGAATGAGAGGCCAAGTGTTGAGGAGAATTATGGGAAACTTGCAAGAGGTTATCTTCGGCACCAAGCTTGCCGTGCTTTTTCCCGCCGTCCCTCTCGCCGTTGCCGCTGATACCTATGACTTTGGACGAGAGTGGATATTTGCTTTGAGCTTAATTGGACTGGCCCCTCTAGCTGAACGTGTTAGCTTTCTCACAGATTGGAGGGCTTCTGAATGCAACATGTGGGAATGCAACAGAGATGATAATAGCACTATTGGCACTTCACAAGAACAAAATCAATGTTGTCAAAAACAGGCAGATGTAAACTCACTCCTTTTGCTTTTGGGGTTGCTCTGCCATTTACTGCCACTGATCTTCAAGTATGCCCTAACAGGGGACCATTACCCTGTAGCCACTAGTACTCTTCAATTGTCAAGAGCAAGTAGTATTATCATGCTTCTTGCCTATGTTGCTTATATCTTCTTCCAACTGAAAACTCAAAGACAGATATTTGATTCCCAAGAGGAAGATGGAGAAGAAGAGAAGGCTGTGATAGGATTTTGGGTAGCATTTACTTGGTTGGTGGGCATGACACTTCTCATATCTTTGCTTTCTGAATATGTTGTGGGAACAATTGAGGCTGCTTCAGATTCTTGGGGTATTTCTGTGAGCTTCATTAGCATAATTTTGCTGCCAATTGTGGGGAATGCTGCAGAACATGCTGGTTCAATCATATTCGCCTTTAAGAACAAGCTGGATATATCTCTAGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGCATAAAAATGGACCTGGATTTTAATCTCCTAGGAACAGGGTGTCTTGCTTTGGCGATAATAGTCACAGCTTTCACTTTGCAGGATGGAACTTCACACTATATGAAAGGAGTGGTGCTTTCCCTGTGTTACATCGTCATTGCTGCTTGCTTTTTTGTCCATAAAGCTCCTTTGGCTGATCAAATTCCAGGGCAGAATGTTAGATTTCAACCATCTATGGACACCATGGTCACTTGA 1170 0.4308 MEDDIEKKGEGSGKKDMVMERKKSDLIVTIQRENSNGGMRGQVLRRIMGNLQEVIFGTKLAVLFPAVPLAVAADTYDFGREWIFALSLIGLAPLAERVSFLTDWRASECNMWECNRDDNSTIGTSQEQNQCCQKQADVNSLLLLLGLLCHLLPLIFKYALTGDHYPVATSTLQLSRASSIIMLLAYVAYIFFQLKTQRQIFDSQEEDGEEEKAVIGFWVAFTWLVGMTLLISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIKMDLDFNLLGTGCLALAIIVTAFTLQDGTSHYMKGVVLSLCYIVIAACFFVHKAPLADQIPGQNVRFQPSMDTMVT 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1484 389 Gene3D - 212 364 IPR044880 -
Lele04g1484 389 Pfam Sodium/calcium exchanger protein 220 361 IPR004837 GO:0016020|GO:0055085
Lele04g1484 389 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 34 103 IPR004713 GO:0006812|GO:0008324|GO:0016020
Lele04g1484 389 FunFam Vacuolar cation/proton exchanger 208 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1484 Lele-ChrLele04 20012874 20015629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1484 21 373 Antiporters AT2G38170 53.695 3.90e-124 365
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1692 25 24604647 24611650 Lele04g1484 04 20012874 20015629 CCT
Lele26g1694 26 20471041 20475198 Lele04g1484 04 20012874 20015629 CCT
Lele27g0396 27 3572925 3582878 Lele04g1484 04 20012874 20015629 CCT
Lele28g1698 28 19911706 19917379 Lele04g1484 04 20012874 20015629 CCT
Lele04g1484 04 20012874 20015629 Lele04g1484 04 20012874 20015629 ECH
Lele01g1230 01 7438365 7441075 Lele04g1484 04 20012874 20015629 hybridization
Lele02g1500 02 19159533 19162202 Lele04g1484 04 20012874 20015629 hybridization