Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1464 ATGTTTTGCTCCATCGCTGTTCCTAACTCTCCAGCCTTCTCTTCCTCTTCTTCTCTCTTCTGCAACAATATGAACTCTATCATATCTCCTCCTCCTTCACCTTCTTCTTCCCGTTTTAGGCTCTTGAAGCCTCCAATCGCCTTGCCCACTCTACCCTCTCCTGCTTCGATTTCTTCTGCCCCCTCGCCATCCTCCTCCTCCTCGCCGACGAACTCCCTCTTGAAGAGGAAGAGACCTACCAGGCTTGATATCCCTGTTGCGTCTTTCGCTTTTGATGCTCCGGCGACGCCGTCTGCGGCGGCTCGGGATTTCTTGGAGGCTGAAGAAAATGGGTTTTCTGTGTATTGCAAGAGGGGAAGGAGGGAGTTTATGGAGGACCGTTACTCCGCTGCCGTTAATCTTCAAGGAAAACCAAAGCAGGCTTTCTTTGGAATATTCGATGGGCATGGAGGAGCAAAAGCTGCGGAATTTGCTGCTCATAACCTGGAAAAGAATGTCTTGAAAGAAGTAATTAGGAGTGACGAAGAAGAAGAAGACATTGAAGAGGCAGTGAAACATGGTTACTTGACCGCAGATTCTGAGTTCCTAGAAGAGGATGTCCAAGGTGGTTCTTGCTGTGTAACAGCATTGATCAGAGATGGCAACCTCATTGTGTCCAATGTTGGTGATTGTCGTGCTGTCATTTGCAGAGGAGGCAAAGCCGAGGCCCTCACATCTGATCATCGGCCCTCGAGGGAAGACGAGAGAGACAGAATTCAAGCTCTGGGTGGCTATGTAGATAAATGCCGTGGAACTTGGAGGATCCAAGGATCTCTTGCCGTGTCTCGAGCAATTGGAGATAAACACCTGAAACAATGGGTGACAGCAGAACCTGAGACTAAAATTCTCAAAATTGAAGCTCAGCATGACTTATTAATACTAGCTTCAGATGGATTATGGGAGAAGATTAGTAATCAGGAAGCAGTGGATATTGCTCGTTCTTTTTGTGTGGAGAGTGATGAACCACAGCCATTGTTGGCCTGTAAAAAGCTGGTAAACTTGTCAGCTTCACGAGGCTCTTTTGATGACATAAGCGTTATGGTAATCAAATTGGGTGACTACATATGA 1107 0.4706 MFCSIAVPNSPAFSSSSSLFCNNMNSIISPPPSPSSSRFRLLKPPIALPTLPSPASISSAPSPSSSSSPTNSLLKRKRPTRLDIPVASFAFDAPATPSAAARDFLEAEENGFSVYCKRGRREFMEDRYSAAVNLQGKPKQAFFGIFDGHGGAKAAEFAAHNLEKNVLKEVIRSDEEEEDIEEAVKHGYLTADSEFLEEDVQGGSCCVTALIRDGNLIVSNVGDCRAVICRGGKAEALTSDHRPSREDERDRIQALGGYVDKCRGTWRIQGSLAVSRAIGDKHLKQWVTAEPETKILKIEAQHDLLILASDGLWEKISNQEAVDIARSFCVESDEPQPLLACKKLVNLSASRGSFDDISVMVIKLGDYI 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1464 368 Pfam Protein phosphatase 2C 112 356 IPR001932 -
Lele04g1464 368 MobiDBLite consensus disorder prediction 53 75 - -
Lele04g1464 368 CDD PP2Cc 110 364 IPR001932 -
Lele04g1464 368 ProSiteProfiles PPM-type phosphatase domain profile. 111 364 IPR001932 -
Lele04g1464 368 SUPERFAMILY PP2C-like 112 366 IPR036457 -
Lele04g1464 368 PANTHER PROTEIN PHOSPHATASE 2C 75 363 IPR015655 GO:0004722|GO:0006470
Lele04g1464 368 SMART PP2C_4 103 362 IPR001932 -
Lele04g1464 368 SMART PP2C_SIG_2 119 364 IPR001932 -
Lele04g1464 368 MobiDBLite consensus disorder prediction 53 77 - -
Lele04g1464 368 ProSitePatterns PPM-type phosphatase domain signature. 142 150 IPR000222 GO:0043169
Lele04g1464 368 FunFam probable protein phosphatase 2C 25 104 367 - -
Lele04g1464 368 Gene3D - 101 366 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1464 Lele-ChrLele04 19858878 19860470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1464 1 368 PP2C-type Phosphatase Gene Family AT2G30020 57.357 4.55e-151 430