Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1456 ATGGAGTTCATAATTCGAAACTATGGTGGGCAATCTGACAAAGCTCAAGTGGAAGACATCGAGAGAAGATGCGCGATAGGCCCATCAGGAAGCGTGTTCCTCTTCACGGACACTATGGGTGACCTCATCTGCAGGATTCGAAACTGTCCCATGTACTACATGCTGGTCGCAGAGATGGACAAGGAGTTAATTGGGGTCATTCAAGGCTCTATAAAAGTGGTCACACTTGCAGCCCATGACTTGGCCAAGGTGGGCTTTGTGCTGGGGCTAAGGGTGGCTCCAAATCATCGGCGAAAAGGGGTGGGATCGAGCTTAGTACGAAGGTTAGAAGACTGGTTCTGTTACAAGGACGTGGACTACGCATATATGGCCACAACGAAAGATAACCATGCTTCTGTCAGCTTCTTCATGGGCAAGTTTGGTTACACCAAGTTTAGAACTCCGTCAATACTTGTAAACCCAGTGAACCATGATCATCCCTTGAGGATCTCATCCAACATGGAGATTCTCAGGCTCAAGGTTGATCAAGCTGAATCACTTTACAGGAACTTCATGGGATCTTCTGAGTTCTTTCCTGATGACATAGACTGTATACTTAGGAACAAGCTAAGTCTGGGGACATGGGTTGCTTATTTTAAAGGGGATAGTTCATGGGATGATTTTGGAAATGATGGTCGAGTTCCTACTAACTGGGCTATGCTTAGTGTATGGAACAGTGGGAAAATCTTTAATCTGAGGTTAAAGGAAGTAACTTTTTCTTGCTTGTTATGTAGAAAGAGTCAGAGTTTGATTGATAAGTTGTTTCCGTGCTTGAAACGGCGGACTACTTTGCCTGATTTCTTAAACCCATTTGGGTTTTACTTCATGTATGGGTTGTGTCATGATGGGCCATTGTCTGGGAAGCTTGTCAGAGGTTTGTGCAAGTTTGTGCACAACATGGCTGCAGAGTCTGAGGATTGTGAGAACATTAAGGTTGTTGTGAGTGAAGTTGGAGGAGGAAGAGATAAGATAAAGCATCATATCCCACATTGGAAATTGCTGTCTTGCCAGCAGGAGGATTTGTGGTGCATAAAGGCCTTGAAAAATATTGATGGGGCACATGAGTTTCATGAATTGACCAAAATCCCACCAACAAGACCTCTTTTTGTAGATCCAAGGGAGGTTTAA 1167 0.4422 MEFIIRNYGGQSDKAQVEDIERRCAIGPSGSVFLFTDTMGDLICRIRNCPMYYMLVAEMDKELIGVIQGSIKVVTLAAHDLAKVGFVLGLRVAPNHRRKGVGSSLVRRLEDWFCYKDVDYAYMATTKDNHASVSFFMGKFGYTKFRTPSILVNPVNHDHPLRISSNMEILRLKVDQAESLYRNFMGSSEFFPDDIDCILRNKLSLGTWVAYFKGDSSWDDFGNDGRVPTNWAMLSVWNSGKIFNLRLKEVTFSCLLCRKSQSLIDKLFPCLKRRTTLPDFLNPFGFYFMYGLCHDGPLSGKLVRGLCKFVHNMAAESEDCENIKVVVSEVGGGRDKIKHHIPHWKLLSCQQEDLWCIKALKNIDGAHEFHELTKIPPTRPLFVDPREV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1456 388 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 3 168 IPR000182 GO:0016747
Lele04g1456 388 Gene3D - 12 148 - -
Lele04g1456 388 Pfam Acetyltransferase (GNAT) family 42 142 IPR000182 GO:0016747
Lele04g1456 388 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 388 - -
Lele04g1456 388 CDD NAT_SF 54 113 - -
Lele04g1456 388 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 2 145 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1456 Lele-ChrLele04 19790721 19791999 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele04g1456 Acetyltransf_1 4.1e-14 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1204 01 7215495 7219733 Lele04g1456 04 19790721 19791999 hybridization
Lele02g1473 02 18944991 18946265 Lele04g1456 04 19790721 19791999 hybridization