Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1452 ATGTAAACCTCACTGCCCAATCCTTCACAGCAGCACCATTGTTGCAGCATCTACTCCTCTCGCATTCTCTCTCTCTCACTTTCTCTTCACTTCGTTTCTCCGATTCAGATGGACCGTCGCTGGCCCTGGAAGAAAAAATCGGATAAGACAGTGCTTGAGAAAGCAGCTGCTGCATTGGACTCTGCTGGTGCTGCTGCTGCTCAGGGCAGTCAGGATAATTACAAGAAGCCAAACTACGTGCAAATTTCTGTGGAGTCATATTCACATCTGAGTAGCTTGGAGGACCAAGTGAAGACATTTGAGGAAAAAGTGCTGACACTGGAAGATGAGGTCGAAGAATTGAATGAAAAGCTGTCAGTGGCAAACTCAGAGATAACTATCAAGGAAAGCTTAGTAAAACAACATGCTAAAGTAGCTGAAGAAGCTGTCTCAGGCTGGGAAAAGGCAGAAGCGGAAGCTTTGGCATTGAAGAATCATCTAGAATCTGTCACACTCTCAAAGCTCACTGCTGAGGATCGGGCATCGCATTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACCTGAAGGAAGAACACGAGCAGAAAATACAGGAAGTTGCTCTCACCAAAACCAAGCAATTAGATAAAATAAAGGGTGAGCTTGACGCAAAGATAGTTAAATTAGAACAGGAACTTCTTAGGTCTGCTGCTGAAAATGGGGCTCTTTCAAGGTCTTTACAGGAGCGCTCTAACATGCTAATAAAAATTAGCGAAGAAAAGGCTCAGGCTGAAGCTGATATTGAGCTTTTGAAGGGAAACATAGAATCATGTGAAAGGGAAATCAATTCACTGAAGTATGAACTTCATGTTGTTTCTAAGGAGCTGGAAATTCGTAACGAAGAAAAGAACATGAGTATGAGATCTGCAGAAGCTGCTAACAGGCAGCATGCAGAGGGTGCTAAAAAAATTGCAAAGTTAGAGGCTGAGTGCCAAAGATTACGAGGTCTGGTGCGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAAATGAAGCTGGAAGTTGAGAATCTTGGCCGAGACTTTGGAGACACTCGATCAAGGAGGTCTTCTGTTAAGCATGCTAATCCTCATTTGTCCCCGTCACCCGATTTCTCCCTAGAGAATATTCAGAAATTTCAGAAGGAGAATGAATTTCTTACAGAGCGTTTATTGACAATGGAAGAAGAAACAAAGATGCTTAAAGAAGCTTTGGCAAAACGAAACAGTGAATTGCAGGCCTCAAGGAGCATGTGTGCTAAAACTCTGAGCAAACTTCAAAGTTTGGAAGCACAACTTCAGCCAATTGACCAGCATAAAGGATCGCCAAAATCCATCATCCAGATAACCCATGAAAGTATTTATGGTCAAAATGCAAGCATTGCACCAAGCTTAACCTCCATGTCTGAAGATGGAAACGATGATATCGGAAAATGTGCTGAGTCTTGGTCTAAAACATCGATCTCAGAATTATCCCAATCCCAAAAAGAGAAGAATATTGATAAATCAAGCATATCTGAGGCCACTAACAAGTTGGAACTGATGGATGACTTTCTGGAGGTGGAGAAGTTGGCCTGTCTATCAAATGATTCCAATGGCTCTATTTCAATGTCTTCAAGCAATACAACTGAAATTGTGATCAACCATGTATCAAAAGTCAGTACTTGCATTGATGGTTCCTCTGAAAGGCGGAGTGATTTGAATCCATTACCCAATCAAGTGTCTTCTGGTGAAGTGTTGTCAGCCCCTGATGCCCAATCTGATGTTAATCACTTGTCACTGACAGAGCTTAGATCAAGAATTTTGACGGTTTTTGAGTCCATGTCTAGCAATGCTGATATAGGAAATATCCTTGAAGATATTAAACATATTTTGGAAGATGCACGTGATGCTTCCACCAACCATTCTGTTGAATACGTACCCCAGGATGTCCATCCTTCTGATGCTACATCTGACAGGCAAGTTAACCCGGAAGATGTTGGCTCACATCTTGAAAAGGAAATCATTTCATCGAAGCAAACAATAGAACACATGCAGATGACCAGAGACTTGGAAGCTGCAATTTCTCTTATTCACGACTTTGTGCTGTTCCTAGGTAGAGAAGCAATGTCAGTTCATGACATTTCTGATGATGGAGGAGTGAAGATAAAGATAGAGGAATTTTCTCACACCTTTAATAAAATCATATGCAATGAAGCAACTTTGCTGCAGTTTGTTATTGATTTGTCATGTGTATTAGCCAAGGCAAGTGAATTCAGATTTAATGTCCTTGGCTATATGGGTACAGAAGCTGAAACTAACAGTCCTGATTGCATTGACAAGATTGCTTTGCCAGAAAATAAGTTAGTTCAAAACAGTCCTTCAGGAGAAAGATATCCAAATGGCTGTTCCCATATTCTAAATCCTTGTGCTGATCCTCAGGTACCTGATGATGGAAATTTGATCTCTACCTATGAATCAAATGGTACTTCACACCAATTCTCAGTGGATAAGTTTAAAGAATTGAAATTAGAGAAAGAGAAGACTGCAATGGATCTGGCAAGATGCACTGAAACTCTTGAATCGACAAAGTCTCAATTACAAGAGACTGAGCAACTTTTGGCAGAAGTAAAATCGCAACTGGCTGCTTCTCAAAGATCAAACAGCTTGTCTGAGACGCAGCTGAAATGTATGGCAGAGTCATACAGGACCCTTGAAACAAGTGCGCAGGAGTTAGAAACCGAGCTGAATCTTCTGAGAGTTAAGACAGAAACTCTGGAGTGTGACCTTCAAGATGAAAAGAGGGGTCGTGTAGATGCTTTGGCCAAGTGTAAGGACCTAGAAGAGCAATTGCGAAGGTATGAGAGTTCAGCAGCTGATAATGACATCAAGACTAAGCAGGAGAGAGATTTGGCGGCTGCGGCAGAGAAGCTAGCCGAGTGTCAGGAAACAATATTTCTTTTGGGCAAGCAGCTACAAACTCTACGCCCTCAAAGGGAGCAGGGTGGATCTCCTTACAGCGAGAGAAGTTCAAAGGTTGATGAAGGGCTTACAGAGGAGGAGCCTACTATTAGTAACCCAAATTTGCAAGAGTTAGATGATATGGACAGTGCTAGTTCAGCATTTGTGCATAGATTGGGTCCAGAGTCACCCTTGTATTTCTCCAACAGTCTTTGTCCATCTGACAATGAAGCAAACCTTGCCACCATATCTCCAGCAAAGAATCCCAAACACAGGCCTACTAAATCAGCCTCCTCCTCCGTTTCTTCCGTCCCCACGCCAGAGAAACTCGCGCATGCACACGGGCGAGGATTTAGTAGATTCTTTTCATCAAAAGGAAAAAGTGGGCGCTAA 3357 0.4242 MXTSLPNPSQQHHCCSIYSSRILSLSLSLHFVSPIQMDRRWPWKKKSDKTVLEKAAAALDSAGAAAAQGSQDNYKKPNYVQISVESYSHLSSLEDQVKTFEEKVLTLEDEVEELNEKLSVANSEITIKESLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALTKTKQLDKIKGELDAKIVKLEQELLRSAAENGALSRSLQERSNMLIKISEEKAQAEADIELLKGNIESCEREINSLKYELHVVSKELEIRNEEKNMSMRSAEAANRQHAEGAKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDFGDTRSRRSSVKHANPHLSPSPDFSLENIQKFQKENEFLTERLLTMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQLQPIDQHKGSPKSIIQITHESIYGQNASIAPSLTSMSEDGNDDIGKCAESWSKTSISELSQSQKEKNIDKSSISEATNKLELMDDFLEVEKLACLSNDSNGSISMSSSNTTEIVINHVSKVSTCIDGSSERRSDLNPLPNQVSSGEVLSAPDAQSDVNHLSLTELRSRILTVFESMSSNADIGNILEDIKHILEDARDASTNHSVEYVPQDVHPSDATSDRQVNPEDVGSHLEKEIISSKQTIEHMQMTRDLEAAISLIHDFVLFLGREAMSVHDISDDGGVKIKIEEFSHTFNKIICNEATLLQFVIDLSCVLAKASEFRFNVLGYMGTEAETNSPDCIDKIALPENKLVQNSPSGERYPNGCSHILNPCADPQVPDDGNLISTYESNGTSHQFSVDKFKELKLEKEKTAMDLARCTETLESTKSQLQETEQLLAEVKSQLAASQRSNSLSETQLKCMAESYRTLETSAQELETELNLLRVKTETLECDLQDEKRGRVDALAKCKDLEEQLRRYESSAADNDIKTKQERDLAAAAEKLAECQETIFLLGKQLQTLRPQREQGGSPYSERSSKVDEGLTEEEPTISNPNLQELDDMDSASSAFVHRLGPESPLYFSNSLCPSDNEANLATISPAKNPKHRPTKSASSSVSSVPTPEKLAHAHGRGFSRFFSSKGKSGR 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1452 1118 MobiDBLite consensus disorder prediction 1022 1036 - -
Lele04g1452 1118 Coils Coil 854 888 - -
Lele04g1452 1118 MobiDBLite consensus disorder prediction 567 586 - -
Lele04g1452 1118 Pfam Filament-like plant protein, long coiled-coil 128 1002 IPR008587 -
Lele04g1452 1118 MobiDBLite consensus disorder prediction 357 380 - -
Lele04g1452 1118 Coils Coil 174 208 - -
Lele04g1452 1118 Coils Coil 249 325 - -
Lele04g1452 1118 MobiDBLite consensus disorder prediction 997 1044 - -
Lele04g1452 1118 Coils Coil 385 412 - -
Lele04g1452 1118 Coils Coil 90 131 - -
Lele04g1452 1118 MobiDBLite consensus disorder prediction 1065 1094 - -
Lele04g1452 1118 Coils Coil 896 985 - -
Lele04g1452 1118 MobiDBLite consensus disorder prediction 1065 1118 - -
Lele04g1452 1118 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 37 1113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1452 Lele-ChrLele04 19747213 19752857 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0080 25 464926 469307 Lele04g1452 04 19747213 19752857 CCT
Lele26g0091 26 489035 493917 Lele04g1452 04 19747213 19752857 CCT
Lele27g2006 27 24243492 24248329 Lele04g1452 04 19747213 19752857 CCT
Lele28g0090 28 497956 509370 Lele04g1452 04 19747213 19752857 CCT
Lele04g1452 04 19747213 19752857 Lele04g1452 04 19747213 19752857 ECH
Lele01g1200 01 7178056 7182198 Lele04g1452 04 19747213 19752857 hybridization
Lele02g1469 02 18899628 18903594 Lele04g1452 04 19747213 19752857 hybridization