Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1451 ATGTCTCTGAGAAGTATCTGCAGAGAGAAAATGGGACTCCGAAACACAAGGAGGGTTGAATCAGAGAGAACAGTACTGATGAAGGAAATAGTGAAGAAATGGTCAAGTAAGAAGAAGAAGGAAGAAGAAGAAGAGGGTTTTCCAGTGGACGTTCCAAAGGGTCATTTTGTGGTTTATGTCGGAGAGAAGAGAATCAGATACATTGTGCCTATTTGGTTTCTGAGACGCCCTGAGTTTCAGAGGTTACTCCATGAAGCTGCTCAAGAGTTTGGGTTTTGCCATCAAATGGGTCTCACGATTCCTTGCCAACAACATGTTTTTGAGTCTCTTGTAACTAAATTGCTCCGACCATGA 354 0.4266 MSLRSICREKMGLRNTRRVESERTVLMKEIVKKWSSKKKKEEEEEGFPVDVPKGHFVVYVGEKRIRYIVPIWFLRRPEFQRLLHEAAQEFGFCHQMGLTIPCQQHVFESLVTKLLRP 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1451 117 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 110 IPR003676 GO:0009733
Lele04g1451 117 Pfam Auxin responsive protein 36 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1451 Lele-ChrLele04 19742767 19743120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1451 25 116 Calmodulin-binding Proteins AT4G34750 38.043 6.37e-18 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1451 04 19742767 19743120 Lele04g1451 04 19742767 19743120 ECH
Lele01g1199 01 7174112 7174471 Lele04g1451 04 19742767 19743120 hybridization
Lele02g1468 02 18893712 18894059 Lele04g1451 04 19742767 19743120 hybridization