Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1448 ATGGCAAATAAGGAAGATCAACCCGTCAAGTCAAGGTTCCGCCGCATCTGCGTCTTCTGTGGTAGCAGCCACGGCAAGAACCCAAGCTACCAGCTCGCCGCTATTCAACTCGCCAAACAACTCGTGGAGAGAAAGATTGATTTGGTTTATGGAGGAGGCAGCATCGGGTTGATGGGTCTCGTCTCTCAAGCCGTCTTCAACGGCGGTCGCCACGTGTTAGGAGTGATTCCCAAGAGTCTTATGCCAAGAGAGATCACCGGAGAGACAGTTGGCGAAGTTCGAGCCGTATCCGGGATGCACCAGCGTAAGGCCGAGATGGCTCGACAAGCCGACGCTTTCATCGCCCTCCCAGGAGGTTATGGTACTCTTGAAGAGCTATTGGAAGTGATAACCTGGGCTCAATTGGGAATTCACGATAAACCAGTGGGCTTGTTGAACGTAGATGGGTATTACAACTCATTGCTGTCATTCATAGATAAAGCTGTGGACGAAGGCTTCGTGACCCCTGCTGCACGTCACATCATCGTCTCTGCCCAAACTGCCCAAGAACTCATGTGCAAGCTTGAGGAATACCAGCCGAAGCACCGTGATGAGACCGCCAAGCTTAGCTGGGAGATGGAACAACACCTGGTTCACTCTCAAACCGCCATGTCCGACATTTACCGTTGA 669 0.5217 MANKEDQPVKSRFRRICVFCGSSHGKNPSYQLAAIQLAKQLVERKIDLVYGGGSIGLMGLVSQAVFNGGRHVLGVIPKSLMPREITGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFVTPAARHIIVSAQTAQELMCKLEEYQPKHRDETAKLSWEMEQHLVHSQTAMSDIYR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1448 222 Gene3D - 3 190 - -
Lele04g1448 222 SUPERFAMILY MCP/YpsA-like 12 191 - -
Lele04g1448 222 FunFam CASP-like protein 4 190 - -
Lele04g1448 222 Pfam Possible lysine decarboxylase 58 187 IPR031100 -
Lele04g1448 222 PANTHER LOG FAMILY PROTEIN YJL055W 7 211 - -
Lele04g1448 222 TIGRFAM TIGR00730: TIGR00730 family protein 15 191 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1448 Lele-ChrLele04 19702650 19704117 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0077 25 447570 449707 Lele04g1448 04 19702650 19704117 CCT
Lele27g2009 27 24264510 24266171 Lele04g1448 04 19702650 19704117 CCT
Lele04g1448 04 19702650 19704117 Lele04g1448 04 19702650 19704117 ECH
Lele01g1195 01 7135105 7136609 Lele04g1448 04 19702650 19704117 hybridization
Lele02g1465 02 18856963 18858432 Lele04g1448 04 19702650 19704117 hybridization