Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1443 ATGTCGTCAAATACTGAACCTACCAATCCAAATTTAAACTCTAGGCTCACCTCGGAAGGGTGCAGTGTTTTGCTGGACATCAACGACGGCGACCGTCTCGTTTTTGCTCGACTCTCTGCTGCCGCGAAGTTGAAAATTGGGAATAAGAACTGCTCTCTGCAGCCTTTAATCGGGTGTAGCTACGGTTGTCTTTTTCAAGTGGAGACTGGACCTAACGGCCCTTTGTTGGCTCGGGTTACTCCTTCAGTCCAAGGTAATGATACTGAAGAGAAAGGGGGCAATCAATCAAACGTTGAGTCTAGGGACAACCGGACATTGATTGACAATAACAAAGCCCAAAGCCTGACTGGTGAAGATATACAAGCTATGAAGAGTCAGGGTGCCAGAGGTGATGAAATTATTGAGGCTCTCATTGCCAATAGTGCTACATTTGAAAAGAAAACAGCTTTTTCACAGGAGAAATATAGACTTAGGAAGCAAAAGAAATATGCACCAAAAGTATTACTGAGGCGTCCTGTTGCTCGAAGTATATGTGAGGCCTACTTTAGGAAGTATCCAGCGAAAATTAGGTTCATGCGTGTGGATACATTATCTCTGCTACTCTCGATGGCTAATGTCTCTTCCCACTCAGACATTCTTCTTGTTGATATGGTTGGTGGCCTTCTTACTGGTGCTGCGGCAGAACGTTTAGGAGGTACAGGTTTTGTGTGCAACTCATATCTAGGAACAGCACCATATTCCATGGATATTGTGAGGATATTTAACTTTAGTGAAGAAATTTGCAAGAGAATTGTCCGGTCTCCCATTTCTGACTTGCTGTCACAAAAAGAATCTCCTGAACAAATTCTACATCGTAACATGGAAAGTCTGACAGATAATCAAATGTCTACATCGGGCAGTGTGGATGAAATCTCTGATCCATCAGGAAATGAAATTTCTGATCAAGGTGCTGAGAATGTTGAGAATACCAATATTCCTGCTAAAAGAGCGTGCAAATCTGCAAAGGCTGGAGAAAGAGCACAACAGGAAACCATTAATTTGTGGAAAGAAAATGGTTTTTCTAGCTTAATTATCGCCGCACCAGGTTTGGATACCTGGACATTGGTTAGAGATCTCTTGCCCCTCTTATCAAATTCGGCTCCCTTTGCTATTTATCATCAATATCTTCAGCCGCTCGCAACTTGCATGCATAATCTACAGGTTGGGAAAATGGCCATTGGCTTGCAAATATCAGAGCCTTGGTTACGTGAATACCAGGTCCTTCCATCAAGAACTCACCCGTGCATGCAAATGAGCGCATTTGGTGGATATATTCTTAGCGGGACTAAGATTTGCAGCAGCAGCTAA 1347 0.4313 MSSNTEPTNPNLNSRLTSEGCSVLLDINDGDRLVFARLSAAAKLKIGNKNCSLQPLIGCSYGCLFQVETGPNGPLLARVTPSVQGNDTEEKGGNQSNVESRDNRTLIDNNKAQSLTGEDIQAMKSQGARGDEIIEALIANSATFEKKTAFSQEKYRLRKQKKYAPKVLLRRPVARSICEAYFRKYPAKIRFMRVDTLSLLLSMANVSSHSDILLVDMVGGLLTGAAAERLGGTGFVCNSYLGTAPYSMDIVRIFNFSEEICKRIVRSPISDLLSQKESPEQILHRNMESLTDNQMSTSGSVDEISDPSGNEISDQGAENVENTNIPAKRACKSAKAGERAQQETINLWKENGFSSLIIAAPGLDTWTLVRDLLPLLSNSAPFAIYHQYLQPLATCMHNLQVGKMAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGTKICSSS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1443 448 MobiDBLite consensus disorder prediction 292 316 - -
Lele04g1443 448 Pfam Gcd10p family 22 277 IPR017423 GO:0030488|GO:0031515
Lele04g1443 448 PANTHER TRANSLATION INITIATION FACTOR EIF3-RELATED 1 447 IPR017423 GO:0030488|GO:0031515
Lele04g1443 448 MobiDBLite consensus disorder prediction 79 106 - -
Lele04g1443 448 PIRSF TRM6 11 448 IPR017423 GO:0030488|GO:0031515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1443 Lele-ChrLele04 19675616 19680580 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1443 04 19675616 19680580 Lele04g1443 04 19675616 19680580 ECH
Lele01g1191 01 7109974 7116463 Lele04g1443 04 19675616 19680580 hybridization
Lele02g1460 02 18820128 18824907 Lele04g1443 04 19675616 19680580 hybridization