Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1422 ATGGAGGCTTTTGTGAAGGCGCCGCCGTGTCGTTGTGGTTCAAGGTCTGTCGTCAGAATGATGGTGGTGATCTTGATGTTATTAGGAGGGTGGTGCCGGGAAGCGACGGGATTGGTGAAAGTGCCGCCAAATTTGAAGATTCCGGCGGTGTTCGTGTTAGGAGATTCCGTTATGGACACCGGCAACAACAACGATTTGGTCACATTGGCTAAGTGCAATTTCCTTCCTTATGGCAGAGACTTCAAAGGCGGCGTCGCCTCCGGCCGGTGTTCCAACGGAAAAGTTCCTTCCGATATTATAGTTCAGGAGCTGGGAATTAAGGAGCTGTTGCCTCCATATAAGGGTCGAAATCTCAAGCCTCAAGATCTGCTCACCGGAGTCAACTTTGCCTCCGCCGGCGCCGGATATGATCCACTCACTTCCCAAATAGCAAGAGCGTCACCAATGGCGGATCAAGTGAAATGGTTCAAGGATTACAAAGAGAAGACAAGAGGGATAGTCGGAGAAGAACAAACAAGGTTCATAATGGAGAACGGGGTGGTTGTGGTGGTGGCCGGCAGCGACGACATCGCCAACACATATTTTGCTGCTTTCATCAGGCAACTCCAGTACGATGTTCCCGCTTACACTGACTTAATGGTCAACGGTGCCTCCGACATCGTCAAGGAATTATATGAGGTGGGGTCACGAAGGATCGGAGTGTTCGGGGCACCTCCGATCGGGTGCGTGCCGTCTCAGAGAACAGTAGGGGGAGGAATTCAGAGAAAGTGTGCAGAAAAAGAAAACGTGATGGCTAAGTTATTTAACTCCAAGCTCCTAAAGCGATTGCAGCAGCTGGAACATAGTCTTCCCAATAGCACTATCCGTTACGTGGACATTTACAACCCTCTCCTTGATCTCATTGTCAACTACAAAAAATATGGTTATAAAGTGTCGGATCGGGGTTGTTGTGGGACTGGCATGATAGAGGCATCAGTTTTGTGCAACCGATATACTCCGACTTGTCCCGATATACAAAATTATGTATTTTGGGACACTTTTCATCCTACTGAAGGTACTTACAGAACTCTCATCCCTCCCATTCTTCAAAAATATGTCGATGACTTCGCCCGTAGCATTTGTTAA 1125 0.4827 MEAFVKAPPCRCGSRSVVRMMVVILMLLGGWCREATGLVKVPPNLKIPAVFVLGDSVMDTGNNNDLVTLAKCNFLPYGRDFKGGVASGRCSNGKVPSDIIVQELGIKELLPPYKGRNLKPQDLLTGVNFASAGAGYDPLTSQIARASPMADQVKWFKDYKEKTRGIVGEEQTRFIMENGVVVVVAGSDDIANTYFAAFIRQLQYDVPAYTDLMVNGASDIVKELYEVGSRRIGVFGAPPIGCVPSQRTVGGGIQRKCAEKENVMAKLFNSKLLKRLQQLEHSLPNSTIRYVDIYNPLLDLIVNYKKYGYKVSDRGCCGTGMIEASVLCNRYTPTCPDIQNYVFWDTFHPTEGTYRTLIPPILQKYVDDFARSIC 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1422 374 FunFam GDSL esterase/lipase APG 39 366 - -
Lele04g1422 374 Gene3D SGNH hydrolase 40 364 IPR036514 -
Lele04g1422 374 Pfam GDSL-like Lipase/Acylhydrolase 50 356 IPR001087 GO:0016788
Lele04g1422 374 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 50 61 IPR008265 GO:0006629|GO:0016298
Lele04g1422 374 CDD SGNH_plant_lipase_like 48 365 IPR035669 -
Lele04g1422 374 PANTHER GDSL ESTERASE/LIPASE EXL3 25 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1422 Lele-ChrLele04 19543318 19546198 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1422 44 370 Pollen Coat Proteome AT1G75910 38.788 5.20e-72 226