LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele04g1419	ATGGCAGCAGTAGTAGGGTTGAGAGGGTTCCAACAATGTTGGTGGAACACAGTGCTACGTTTGATGTTGTTGGGTGCTTTCTGGAAAACCGAGGGACTGGTGAAACTGCCGCCGAATACGACAACTCCACCGGCAGTGATAGCTTTCGGAGATTCAATATTGGACACCGGTAACAACAACAACATTAAAACTCTCGTCAAGGCCAATTTCCCTCCTTATGGTAAAGACTTTCAGGGAGGTATCCCCACCGGCCGCTTTTGCAACGGCAAGGTCCCTTCTGACCTATTAGTTGAAGAACTAGGGATTAAGCAGTATTTGCCTGCATATTTGGATCCAAACCTCAAGCCTAGTGATCTTCCAACTGGTGTCTGCTTTGCCTCTGGTGCCTCAGGCTATGATCCATTGACACCCAAAATAGTGTCAGCCATACCGTTGTCGGATCAAGTAGAGATGTTCAAGGAATACATAGAGAAGCTGAAGGGAACGGTGGGAGAGGAAAGAGCAAAGTACATAGTGGCGAACAGTGTGTATGTGGTGGTGGCAGGAAGCGACGACATAGCCAACACTTACTTCATAGCACGCGTTAGACAGCTCCAATATGACATTCCTTCTTACACTGATCTTATGGTTAACGGAGCCTCTGATTTCTTGAAGCAAATATATGAGCTTGGGGCAAGGAGGATGGCAGTGCTGAGTGCACCACCAATCGGATGTGTGCCATCACAGAGAACTCTGGCCGGTGGGATTGTAAGACAGTGTGCTGATAAGTACAACGTTGCTGCCAGATTATTTAACTCCAAACTCTCCAACCAGCTCGATTCTCTCAATCGCAATTTGCCTAACTCCAGAATCGTCTTCGTTAATGTCTACGACTCTCTCCTTGATATCATCCTCAACTACCAAAAATACGGCTATAAAGTTGTGGATAAGGGGTGTTGTGGCACTGGAAATATTGAGGTTGCCGTGTTGTGCAACCATTTGGCTCCCACGTGTCCCGATGTCTCCAATTACGTGTTTTGGGATAGTTATCATCCTACTGAAGGAGTCTACAAAATACTCATTAAGCAAGTTCTTCAGACATATCTCCCTCGTCTCCTTGCTTGA	1104	0.4647	MAAVVGLRGFQQCWWNTVLRLMLLGAFWKTEGLVKLPPNTTTPPAVIAFGDSILDTGNNNNIKTLVKANFPPYGKDFQGGIPTGRFCNGKVPSDLLVEELGIKQYLPAYLDPNLKPSDLPTGVCFASGASGYDPLTPKIVSAIPLSDQVEMFKEYIEKLKGTVGEERAKYIVANSVYVVVAGSDDIANTYFIARVRQLQYDIPSYTDLMVNGASDFLKQIYELGARRMAVLSAPPIGCVPSQRTLAGGIVRQCADKYNVAARLFNSKLSNQLDSLNRNLPNSRIVFVNVYDSLLDIILNYQKYGYKVVDKGCCGTGNIEVAVLCNHLAPTCPDVSNYVFWDSYHPTEGVYKILIKQVLQTYLPRLLA	367

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele04g1419	367	Gene3D	SGNH hydrolase	38	362	IPR036514	-
	Lele04g1419	367	PANTHER	GDSL ESTERASE/LIPASE EXL3	43	357	-	-
	Lele04g1419	367	FunFam	GDSL esterase/lipase APG	34	362	-	-
	Lele04g1419	367	Pfam	GDSL-like Lipase/Acylhydrolase	46	356	IPR001087	GO:0016788
	Lele04g1419	367	CDD	SGNH_plant_lipase_like	44	361	IPR035669	-
	Lele04g1419	367	ProSitePatterns	Lipolytic enzymes "G-D-S-L" family, serine active site.	46	57	IPR008265	GO:0006629\|GO:0016298

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele04g1419	Lele-ChrLele04	19509690	19512177	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele04g1419	44	359	Pollen Coat Proteome	AT1G75910	42.006	2.04e-81	250