Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1402 ATGGTGGGAGATAAATCGGAAAACTTGGTTTACCTTCATGGGGACCTTGATTTAAAAATTCTTGAGGCTCGATGTTTGCCGAATATGGACTTGCTTTCGGAACGTGTCAGTCAATTCTTTTCCCTCTTCAACTCCTGCACAAGTTCATTTTCCGGTAGACGGAGACGCCATCGTCACAGACAAATCATTACCAGCGATCCTTACGTAAAAGTTTGCCTCGCCAAAGCTACGGTGGCTCGCACTCGTGTCATCTCCAACTCGCAGGATCCAACGTGGAATGAACATTTCAAAATCCCTCTCGCTCATCCCGCCTCGCAGGTCGAGTTCTACGTAAAGGACAATGACTTATTCGGCGCTGATTTCATCGGAGTCGCTACCGTCTCCGCCGAGAGAATCTTATATGGTGAACTCATCAGCGATTGGTTCCCCATACTTGGTTCTTACGGTAAACCGCCCAAACCTGATTGTGCCATTCGTCTCGAGATGAAATTCACGAAATGTGAGGATAGTCCATTGTACAGTTTCGGAATTTCTTCCAATCCGGACCGTTTCAAAGTGCGGGATTCCTATTTTCCAGTGCGTCATGGAGGATCGGTGACGTTATATCAGGACGCACACGTTCCAGAGTCGATGGTGCCGAAAATTGAATTGGAGAATGGCACTTTCTTCGAGCAAGGCAGATGTTGGGAAGATATATGTCACGCAATTTTGGAAGCGCACCATTTGGTTTACATTATAGGGTGGTCAATCTACCATAAGGTGAAGCTGGTGAGGGAGCCGACGAAGCCCTTACCTAATGGTGGTGATTTGATTTTGGGGGATTTGCTAAAGTACAAGTCTGGAGAAGGTGCGCGAGTTTTGTTATTGGTTTGGGATGATAAGACTTCACACCGCAAATTTTTCATTAATACGGATGGAGTAATGCATACTCACGATGAAGAAACCCGAAAATTTTTCAAACACTCTTCTGTTTTCTGTGTGCTGTCACCTCGATATGCAAGCAAGAAATTTCAGGTTGTTGGAACCCTCTTTACACATCATCAGAAATGTGTGATCGTGGATACTCAAGCTCAAGGCAATAACCGCAAGATAACTGCATTTATAGGTGGTCTAGACCTGTGTGATGGCCGGTATGACACACCTGAGCATCGACTTTTCCGAGATCTTGACACTGTTTATGAGGATGATTATCACAACCCTACATTTCCTGTTGGAATGAAGGAACTATGGGTTTCAAAGGAAGAAGATCCTGAAAACTGGCATGTTCAGATTTTTCGATCAATAGATTCAGGCTCATTGAAAGGATTTCCAAAGGATGTTTATGAAGCTGAAGCTCAGAACCTTGTTTGTGCAAAAAATTTGGTCATTGACAAATGTATACAAACAGCATACATACAGGCTATCAGATCTGCTCAACATTTTATTTACATTGAGAATCAATATTTTGTTGGATCATCTTTTGCATGGCCATCTTACAGAGAAGCAGGTGCTGACAATTTAATTCCTATGGAGTTGGCATTGAAGATTGTCAGCAAAATTAGAGCCAATGAGAGATTTTCTGTTTATGTTGTTATACCAATGTGGCCTGAGGGCGTCCCTTCTTCTGCCTCAGTTCAAGAGATTCTTTACTGGCAGGGACAAACTATGCAAACGATGTATGAAATCATAGCACAAGAGTTGAAATCCATGAGCATTCACAATATACACCCAACAGATTACCTCAATTTCTACTGTCTGGGAAATCGGGAGAACTTGCCGCCTGAAGTTTTAAATTCAAGTAATTCAACTCCAAATAACTACAGTGATACGGTTTCCGCTTCACAAAAGTTCCAACGCTTTATGATTTACGTGCACGCCAAGGGTATGATTGTGGATGACGAGTATGTTTTACTCGGTTCCGCCAATATCAATCAACGGTCGATGGCTGGTTCAAGAGATACAGAGATAGCAATGGGTGCATATCAACCCCATCACACATGGGGAAGGAAAGGGGGACATCCTCACGGTCAGGTTTACGGGTATAGAATGTCATTGTGGGCAGAACATCTAGGGAAGGTAGATGATTGCTTCAAGGAGCCTAAAAGTTTGGAATGTGTGGAGAAAGTGAACAAGATTGCGAGTGAAAACTGGAAGAAGTACACAGCTAACGTGTTCAGTCCATTGCAAGGGCACCTTCTGAAATATCCAATATATGTAGATGTGAATGGCAAGGTACGTCCCATATCTGGATTCGAAACTTTTCCCGATGTCGGTGGCAAGGTACATGGCAGCCGCACTACCCTTCCTGATGTCCTCACTACGTAA 2304 0.4353 MVGDKSENLVYLHGDLDLKILEARCLPNMDLLSERVSQFFSLFNSCTSSFSGRRRRHRHRQIITSDPYVKVCLAKATVARTRVISNSQDPTWNEHFKIPLAHPASQVEFYVKDNDLFGADFIGVATVSAERILYGELISDWFPILGSYGKPPKPDCAIRLEMKFTKCEDSPLYSFGISSNPDRFKVRDSYFPVRHGGSVTLYQDAHVPESMVPKIELENGTFFEQGRCWEDICHAILEAHHLVYIIGWSIYHKVKLVREPTKPLPNGGDLILGDLLKYKSGEGARVLLLVWDDKTSHRKFFINTDGVMHTHDEETRKFFKHSSVFCVLSPRYASKKFQVVGTLFTHHQKCVIVDTQAQGNNRKITAFIGGLDLCDGRYDTPEHRLFRDLDTVYEDDYHNPTFPVGMKELWVSKEEDPENWHVQIFRSIDSGSLKGFPKDVYEAEAQNLVCAKNLVIDKCIQTAYIQAIRSAQHFIYIENQYFVGSSFAWPSYREAGADNLIPMELALKIVSKIRANERFSVYVVIPMWPEGVPSSASVQEILYWQGQTMQTMYEIIAQELKSMSIHNIHPTDYLNFYCLGNRENLPPEVLNSSNSTPNNYSDTVSASQKFQRFMIYVHAKGMIVDDEYVLLGSANINQRSMAGSRDTEIAMGAYQPHHTWGRKGGHPHGQVYGYRMSLWAEHLGKVDDCFKEPKSLECVEKVNKIASENWKKYTANVFSPLQGHLLKYPIYVDVNGKVRPISGFETFPDVGGKVHGSRTTLPDVLTT 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1402 767 SUPERFAMILY Phospholipase D/nuclease 188 424 - -
Lele04g1402 767 PIRSF PLD_plant 1 409 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lele04g1402 767 PIRSF PLD_plant 403 767 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lele04g1402 767 Gene3D Endonuclease Chain A 436 658 - -
Lele04g1402 767 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 166 IPR035892 -
Lele04g1402 767 Pfam C2 domain 14 144 IPR000008 -
Lele04g1402 767 CDD C2_plant_PLD 10 165 - -
Lele04g1402 767 Pfam Phospholipase D C terminal 687 757 IPR024632 -
Lele04g1402 767 SUPERFAMILY Phospholipase D/nuclease 460 699 - -
Lele04g1402 767 Pfam Phospholipase D Active site motif 614 640 IPR001736 GO:0003824
Lele04g1402 767 Pfam Phospholipase D Active site motif 343 377 IPR001736 GO:0003824
Lele04g1402 767 Gene3D C2 domain 9 165 IPR035892 -
Lele04g1402 767 SMART C2_3c 15 141 IPR000008 -
Lele04g1402 767 PANTHER PHOSPHOLIPASE D 410 758 IPR015679 -
Lele04g1402 767 SMART pld_4 342 377 IPR001736 GO:0003824
Lele04g1402 767 SMART pld_4 613 640 IPR001736 GO:0003824
Lele04g1402 767 ProSiteProfiles C2 domain profile. 1 142 IPR000008 -
Lele04g1402 767 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 342 377 IPR001736 GO:0003824
Lele04g1402 767 Gene3D Endonuclease Chain A 218 404 - -
Lele04g1402 767 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 613 640 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1402 Lele-ChrLele04 19415626 19420724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1402 1 766 Phospholipase D Gene Family (Wang group) AT2G42010 48.432 0.0 816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1402 04 19415626 19420724 Lele04g1402 04 19415626 19420724 ECH
Lele01g1156 01 6871224 6875762 Lele04g1402 04 19415626 19420724 hybridization
Lele02g1422 02 18537600 18543768 Lele04g1402 04 19415626 19420724 hybridization