Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1380 ATGGATTTTTCTCCCCCGTTTACCATATTAGAAGCCACTCAAGGTAGTTTCAACAAAGACAATGCATCCATCATGGAAGATGAGAAATCCAGAGATTTGAACAAACTGAAACAAACAACAATTGGTAAACCTCCACGGAACCTCTCCCTCTTAAGACATAGCATCAGCTCCAACAGGTTGCAAGCTGCCACAGATTTGAGTTCTGATTCAGGGGTTTTTGGGAGTGAATCGTCTTCTGACGAGAAGGCAGAGTTTCAACCCATATATCGGTCAGGAAGTTGCGCTGAAATTGGACCGAAACAGTACATGGAAGATGAACACATCTGTGTTGATAATCTTATTGAGAAACTAGGTTCAGTTTCAGAAATTCCTTCTCATGGAGCTTTCTACGGGGTATTTGATGGTCATGGTGGGACTGATGCAGCTACATATATAAGAAATAACATCCTCAAATTTATAGTTGGGGACCCCCATTTTCCAACTTACCTAGAGAAGGCAATTAAAAGTGCCTTTCTGAAAGCTGATTATGCATTTGCAGATGCTAGTTCGCTTGACATCTCTTCTGGCACCACTGCTTTAACTGCACTTGTATTTGGAAGGAGCCTGATAGTTGCGAATGCCGGGGATTGCCGAGCCGTGCTAGGGAGGCGAGGGAGAGCAATAGAGATGTCAAAAGACCACAAACCAAATAGCAACTCAGAGAGGATAAGGATTGAGAAACTTGGTGGAGTGGTATATGATGGATACCTGAATGGGCAACTCTCTGTTGCGCGTGCGTTAGGAGACTGGCACATGAAAGGTCCCAAGGGTTCTGCCTGCCCTTTAAGTGCCGAGCCAGAGTTGCAGGAAATGCTCTTGACGGAGGACGACGAGTTCTTGATTATGGGATGTGACGGCCTTTGGGATGTTATGAGCAATCAATGTGCTGTGACCATGGCGAGGAGAGAGTTGATGTTACATAATGATCCCGAGAGGTGTTCAAAAGAGCTTGTGAGAGAGGCTCTTAAGCGCAACACTTGTGATAATTTAACTGTCATTGTGGTGTGTTTCTCCCCAGATCCTCCTCCTCGGATTGAGCCGCCTCCTTCTCGAGTTAGGAGGAGTATTTCGGCGGAAGGGCTCAATTTACTCAAGGGTGTACTGGATTGTAATTCATGA 1158 0.4534 MDFSPPFTILEATQGSFNKDNASIMEDEKSRDLNKLKQTTIGKPPRNLSLLRHSISSNRLQAATDLSSDSGVFGSESSSDEKAEFQPIYRSGSCAEIGPKQYMEDEHICVDNLIEKLGSVSEIPSHGAFYGVFDGHGGTDAATYIRNNILKFIVGDPHFPTYLEKAIKSAFLKADYAFADASSLDISSGTTALTALVFGRSLIVANAGDCRAVLGRRGRAIEMSKDHKPNSNSERIRIEKLGGVVYDGYLNGQLSVARALGDWHMKGPKGSACPLSAEPELQEMLLTEDDEFLIMGCDGLWDVMSNQCAVTMARRELMLHNDPERCSKELVREALKRNTCDNLTVIVVCFSPDPPPRIEPPPSRVRRSISAEGLNLLKGVLDCNS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1380 385 Pfam Protein phosphatase 2C 92 342 IPR001932 -
Lele04g1380 385 PANTHER PROTEIN PHOSPHATASE 2C 74 348 IPR015655 GO:0004722|GO:0006470
Lele04g1380 385 SMART PP2C_SIG_2 105 350 IPR001932 -
Lele04g1380 385 CDD PP2Cc 89 350 IPR001932 -
Lele04g1380 385 ProSiteProfiles PPM-type phosphatase domain profile. 90 350 IPR001932 -
Lele04g1380 385 FunFam Probable protein phosphatase 2C 22 75 353 - -
Lele04g1380 385 SMART PP2C_4 80 348 IPR001932 -
Lele04g1380 385 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Lele04g1380 385 Gene3D - 73 353 IPR036457 -
Lele04g1380 385 SUPERFAMILY PP2C-like 85 351 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1380 Lele-ChrLele04 19298925 19300620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1380 1 382 PP2C-type Phosphatase Gene Family AT2G33700 72.135 0.0 555