Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1379 ATGACTGTCGTTATGCTTAGCTTTCCTTATCGAATTATCGAAGAAAACCTAAAGGGGATGTTCGAAGACAGAGAGTGCCATAAAGCTGTTGGAAAGAGAAGATTGGACGATATGATAGAGGATGCAGTTGGACATCGACGATTTCCCTATAATTTTCCGACACGTGGAGGGTCATTATTGATGGGTGGCGTTTTATCTTCTTCTCAAGTCTTCGTTTCCTCTCTGCTTCTCTTGCAAGCCACGAATTTGCTTTGGGCTGTTTCTTGCGTGCTTGTGCTTTTCACAGTACCTCCATATGTGATCAGTAGTGGTAATTCGTCGAGACCGGCCGTCGTGCAAATCGGCGCTCTCTTCACCTTTGGTTCTACCATTGGCAAGGTAGCTAAAATCGCGTTGGAGGAAGCGGTGAAGGATGTCAACGCTAATGCTAGCATACTCCATGGAACTAAACTTGTCCTTACTGAGAAAAATTCCAATTGCAGTGGTTTCTTGGGCATGGTTCAAACTTTGCGGTTCATGGAGACTGATGTGGTGGCAATCATAGGTCCACAATCTTCTGTTGTTTCTCACATAATATCTCATGTGGTAAATGAGCTCCAAGTCCCTCTGTTGTCATTTGCAGCTACGGACCCAGCCCTATCCAACCTTCAGTTCCCTTTTTTTGTGAGAACAACGATGAGTGATTTGTACCAAATGGCTGCAGTTGCTGACATTGTTGATTATTATGGTTGGAAGGAGGTCATTACTATTTTTATAGATGATGATTTTGGACGAAATGGCGTGTCAGCCTTGGATGATCAACTATCAGCTAGGCGCTGTAGAATCTCTTACAAGGCAGGAATTAGATCAGAACCTGTAGTTGATCGGAGTGAAATCACGGATTTGCTGGTGAAGGTGGCTCTAATGCAATCTCGGGTCATTGTTCTCCATGTAAATCCTGATTCAGGATTTATGATTTTCAATGTTGCACAGTATCTTGGGATGACTGGGAATGGCTACGTATGGATAGCCACAGACTGGCTCTCCTCTGTTGTGGATTCTGCTTCTCTCTCTTCAGATTCAATGAGTGTTCTTCAGGGCGTTCTTTTTTTACGCCAACATACTCCCGATTCAGATAGAAAAAAAGCATTTATGTCTTGGGGGAACAAGTTAACTGGAGGCTCTGTGGGGTTAAGTTCGTATGGCCTTCATGCATATGATACTGTTTGGGTGCTTGCACATGCTATTGATGCATTCTTCAACCAGGGTGGGATTATAACATTTTCTAATGACTCCAGGATACATGATGTTGACGAAGGTAATCTTAACCTTGAGGCAATGGGCATTTTTGACAATGGAACGCTTCTGTTGAACAAAATATTGCAGAGCAACTTTGTTGGTTTAACAGGTCCCGTAAAATTTGAGTCAGACAGATCTCTTGTTCGTCCTGCATATGATATTATCAATGTGGTAGGAACTGGGATTCGTCAGGTTGGTTTCTGGTCCAACTATTCTGGTCTGTCCATTGTACCTCCTGAGACATATTACCGTGAATTTGTATCCCCCATTCAAGGAACTGATATGTTTAGAGGTTTCTGCATTGATATATTCACGGCAGCTGTAAACTTGTTACCATATGCTGTTCCATATCGCTTTGTCCCATTTGGAGATGGCCGTAAAAACCCAAACTACGATGAACTTGTCAGGTTGATCACCACAGGGAAACCAAACTCTGGTGGATGGTCTTTTCTGCTGCCATTTACTCCTTTAATGTGGATTGTCACTGCTTCTTTCTTCTTTTTCGTTGGGATAGTTGTATGGATTCTGGAACATAGAATAAATGACGAGTTCAGGGGTCCACCTAGACAGCAAATTATAACCATTTTATGGTTTAGCTTGTCAACTCTATTCTTCGCCCACAGAGAGAATACTATGAGTACTCTTGGTCGTATGGTGGTAATCATATGGCTGTTTGTGGTTTTGATAATCAATTCAAGCTACACGGCAAGTTTGACATCAATCCTCACAGTACAGAAACTATCTTCTACTATCAAAGGAATAGACAGCTTAAAAGCTGGTGATGAACCTATAGGGTATCAAGTGGGTTCATTCGCAGAACATTATTTGGCCGACGATATTGGAATATCCAAATCCAGGCTCGTTGCCCTTGGATCTCCTGAAGAGTATGCCAAGGCGCTCCAGCTTGGTCCTGAAAATGGAGATGTTGCTGCTATTGTTGACGAACGACCCTATGTTGAAATTTTCTTATCAACCCAATGCAGCTTCAGGATAGCATTCCCACGGGACTCCCCTCTGGCCACTGACTTGTCAACTGCAATTCTACAACTTTCTGAAAATGGTGAACTGCAGCGGATTTATGACAAGTGGCTTGTAGGAAGAGCCTGTAGTACGGATGATACTGAAATTGATTCAGATCGGCTTCGGTTTAAAAGCTTCTGGGGTCTCTTTCTTAGATGTGGGATCGCTTGCATTGTTGCTCTTTGTATCTATTTTTTGCAGATTATGCTGCAGTTACGCTATTCTCCTCCTACTGCTTAA 2538 0.4279 MTVVMLSFPYRIIEENLKGMFEDRECHKAVGKRRLDDMIEDAVGHRRFPYNFPTRGGSLLMGGVLSSSQVFVSSLLLLQATNLLWAVSCVLVLFTVPPYVISSGNSSRPAVVQIGALFTFGSTIGKVAKIALEEAVKDVNANASILHGTKLVLTEKNSNCSGFLGMVQTLRFMETDVVAIIGPQSSVVSHIISHVVNELQVPLLSFAATDPALSNLQFPFFVRTTMSDLYQMAAVADIVDYYGWKEVITIFIDDDFGRNGVSALDDQLSARRCRISYKAGIRSEPVVDRSEITDLLVKVALMQSRVIVLHVNPDSGFMIFNVAQYLGMTGNGYVWIATDWLSSVVDSASLSSDSMSVLQGVLFLRQHTPDSDRKKAFMSWGNKLTGGSVGLSSYGLHAYDTVWVLAHAIDAFFNQGGIITFSNDSRIHDVDEGNLNLEAMGIFDNGTLLLNKILQSNFVGLTGPVKFESDRSLVRPAYDIINVVGTGIRQVGFWSNYSGLSIVPPETYYREFVSPIQGTDMFRGFCIDIFTAAVNLLPYAVPYRFVPFGDGRKNPNYDELVRLITTGKPNSGGWSFLLPFTPLMWIVTASFFFFVGIVVWILEHRINDEFRGPPRQQIITILWFSLSTLFFAHRENTMSTLGRMVVIIWLFVVLIINSSYTASLTSILTVQKLSSTIKGIDSLKAGDEPIGYQVGSFAEHYLADDIGISKSRLVALGSPEEYAKALQLGPENGDVAAIVDERPYVEIFLSTQCSFRIAFPRDSPLATDLSTAILQLSENGELQRIYDKWLVGRACSTDDTEIDSDRLRFKSFWGLFLRCGIACIVALCIYFLQIMLQLRYSPPTA 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1379 845 Pfam Ligand-gated ion channel 584 823 IPR001320 GO:0015276|GO:0016020
Lele04g1379 845 Gene3D - 568 700 - -
Lele04g1379 845 FunFam Glutamate receptor 757 789 - -
Lele04g1379 845 SMART GluR_14 501 792 IPR001320 GO:0015276|GO:0016020
Lele04g1379 845 Pfam Receptor family ligand binding region 130 485 IPR001828 -
Lele04g1379 845 SUPERFAMILY Periplasmic binding protein-like II 502 790 - -
Lele04g1379 845 CDD PBP1_GABAb_receptor_plant 114 504 IPR044440 -
Lele04g1379 845 Gene3D - 130 475 - -
Lele04g1379 845 Gene3D - 742 797 - -
Lele04g1379 845 SUPERFAMILY Periplasmic binding protein-like I 106 505 IPR028082 -
Lele04g1379 845 FunFam Glutamate receptor 227 383 - -
Lele04g1379 845 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 398 410 - -
Lele04g1379 845 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 185 213 - -
Lele04g1379 845 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 125 141 - -
Lele04g1379 845 PIRSF IGluLR_plant 563 844 IPR017103 -
Lele04g1379 845 PIRSF IGluLR_plant 502 569 IPR017103 -
Lele04g1379 845 PIRSF IGluLR_plant 81 508 IPR017103 -
Lele04g1379 845 FunFam Glutamate receptor 573 703 - -
Lele04g1379 845 PRINTS Metabotropic glutamate GPCR signature 212 231 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele04g1379 845 PRINTS Metabotropic glutamate GPCR signature 247 264 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele04g1379 845 PRINTS Metabotropic glutamate GPCR signature 56 68 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele04g1379 845 PRINTS Metabotropic glutamate GPCR signature 180 206 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele04g1379 845 PRINTS Metabotropic glutamate GPCR signature 231 247 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele04g1379 845 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 571 835 - -
Lele04g1379 845 Gene3D - 227 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1379 Lele-ChrLele04 19290673 19298372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1379 105 844 Ion Channels AT1G42540 57.500 0.0 981