Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1366 ATGGGTCATATGGGTGCCACCAAAATGTGGCAACATCAAACTGATACCAGTAGACAGAATGGAAAATGCAGCAATACAAGGGTGTTTAGAAATTCTGATGCTGAGCTGATTTTTGGCTTCTACAAAAGGCTGGAACATGTGGAAAATATCTTCAAAGCTGAGGCTTTAGCTGTATTACAAGGGCTAACAATTGGGGCACGAAGAGGATATACAAATTTGATACTTGAGTGTGACAATCTAACAATCACCAAAGTTTTGCAAGGCTTGAAGCCATCTAATATAATTGGACTTCAATATGCAAAGGATAAGGTAGGGCGTACGAAGGTTTACCACATATATCGGGCTGACCATGAGTGTGCCAACTTACTGGCCGATCATGCAATTTCTTCTCAAGATGTAACCACTGAGATTTGCAAGATTACTAAGTACCAAATAATGAAAGGGCTAGATACTATTTATAAGAAGTTGAGAAAACAATTAGAGGACAACAAAAGAAAATTCAATGCTAACAGTGCTAGCTACTTGGGAATGGAGCTGTTAAAATCTAATGATGAGGGGAATGAAAAATCGGTACTCAAGGCCTTGTGGCATCACTCAGATGCTCTATTGTGCTGCGCTTTAAAGGTTTCTTGA 633 0.3934 MGHMGATKMWQHQTDTSRQNGKCSNTRVFRNSDAELIFGFYKRLEHVENIFKAEALAVLQGLTIGARRGYTNLILECDNLTITKVLQGLKPSNIIGLQYAKDKVGRTKVYHIYRADHECANLLADHAISSQDVTTEICKITKYQIMKGLDTIYKKLRKQLEDNKRKFNANSASYLGMELLKSNDEGNEKSVLKALWHHSDALLCCALKVS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1366 210 Pfam Reverse transcriptase-like 17 127 IPR002156 GO:0003676|GO:0004523
Lele04g1366 210 MobiDBLite consensus disorder prediction 1 24 - -
Lele04g1366 210 CDD RNase_H_like 28 124 IPR044730 -
Lele04g1366 210 MobiDBLite consensus disorder prediction 9 24 - -
Lele04g1366 210 Coils Coil 146 166 - -
Lele04g1366 210 Gene3D - 11 129 IPR036397 GO:0003676
Lele04g1366 210 PANTHER OS05G0353850 PROTEIN 11 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1366 Lele-ChrLele04 19194864 19196211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1366 174 208 Homeobox Transcription Factor Family AT1G52150 65.714 8.38e-11 58.9