Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1354 ATGCCTGCGAATAGAGTAACAGAGGAGGAGGTGAGGGGGGAAAGCGAGGAGAATAGGAAGCAAATCTCGTCGTTTTCGAGATCATCTTCGTCGTCGTCGTCGACTTCGGATGATAGAGAGTATGAAGTTCAGGACCTGAGAGACAGGTTGAAATCGTCGCGAGGAAGCCGATTCCAATTGCTTGAGCATGAGTTGGAGGAGCTCAACCAGAAGAAATTCAGTCGCCACGTCCTTGATGGCCTCCGAGGCTTCTCGAAAGATTTCATCATTCATCCTGAGAACAGGTGGCATCGGGCATGGAGAAAATTCATATTGCTATGGGCAATATACTCATCCTTCTTCACCCCAATGGAGTTTGGATTTTTTCGTGGGCTAGACGAGGATCTCTTTATACTGGACATAATTGGCCAAGTTGCATTTCTTGTAGACATTGTTGTCCAGTTCTTCGTTGCTTATAGAGACAGTCAGACCTATCGTATGATCTACAAGCCAGCCCCTATAGCTCTGCGGTATCTAAAATCTAGCTTTATCTTTGATCTTCTTGGATGCATGCCTTGGGACATCATCTATAAGGCTAGTGGAAGAAGAGAGGGAGTGAGGTATCTTCTGTGGATAAGATTATACCGGGTGCGGAAAGTGACTGAATTTTTCCAGAGGCTGGAAAAGGATATACGTATCAATTACATGTTTACTAGGATTGTGAAACTTATAGTAGTTGAACTCTACTGCACCCATACAGCTGCCTGCATCTTCTACTACCTGGCCACCACACTACCTCCATCCCGAGAGGGGTACACATGGATAGGAAGTTTAAAGATGGGCGACTACAGTTATATGAATTTCAGAGACATTGATCTTTGGAAGCGTTACACAACATCTTTGTATTTCGCTATTGTTACAATGGCCACTGTTGGCTATGGAGACATACATGCAGTAAATATGAGGGAGATGATATTCATAATGATATATGTTTCGTTTGATATGGTTCTTGGTGCTTATTTAATCGGTAACATGACGGCTTTAATAGTCAAAGGATCAAAAACAGAAAAGTTTAGAGATAGAATGGCAGATCTCTTGAAATATATGAATAGAAACAGACTTGGAAGGGAAATTCGTGAACAAATAAAAGGCCATATGCGCTTACAGTATGAAAGTAGCTACACTGAGCCAGCTGTTACTCAGGACCTGCCCATTTCAATTCGCTCCAAGATATCCCAAGAGTTATACTTGCCATACATCCAGAAGGTCCCCCTCTTTAAGAATTGCTCTTCAGAATTTATCAATCAGATCGTTATCAGGCTACATGAGGAATTCTTTCTCCCAGGAGAAGTGATATTGGAACAAGGAAATGTTGTAGATCAACTATACTTTGTCTGTCATGGTTTGCTGGAGGAAGTAGGCCCCTGTGAAAATGGATCTGAAGACACTGTTTCACTTTTAGAGCCTAAGAGTTCATTTGGGCATATATCCATTCTATGTAACATTCCTCAACCATATACTGTTAGGGTCTGTGAACTGTGTAGGCTTCTGCGGCTTGATAAACAATCATTTACGGATATCCTTGATATATACTTCTATGATGGGAGGAAAGTATTAAACAACCTTCTAGAGGGAAAAGATTCTAGTCGTGGTAAGCAATTGGAATCAGATATCACATTCCATATTGGAAAGCAAGAAGCTGAACTTGCTTTGAAGCTCAATAATGCAGCTTTTAATGGGGATCTGAATCATCTTAAAGGATTGATTCGAGCTGGAGCTGATCCAAACAAGACAGATTATGATGGACGGTCACCGTTGCATCTTGCAGCATCTAGAGGATATGAAGACATCACCGTTTTCCTTCTTCAGGAAGGTGTAGATATCAATATGAGAGACAACTTTGGGAACACACCCTTACTTGAAGCTGTAAAGAATGGAAATGATCGAGTTGCTTCTTTACTTGTTGGAAAAGGGGCTTCTATGAACATAGAGGATGCTGGTAGTGTTCTGTGTAATGCTGTTGCAAGGGGAGATTCAGATTATCTTAAAAGGCTATTATCTTATGGCATGGATCCTAACACAAAAGATTATGATTACCGAAGCCCTCTTCATGTTGCTGCAGCTGAGGGTTTATTCTTAATGGCAAAGTTTCTGATAGAAGCTGGAGCTAGCGTTTTCATCCAAGACAGATGGGGAAATACTCCACTTGATGAAGCCAAGATGTGTGGAAATAAGAATCTGATCACACTATTGGAAGACGCAAAGTCTGCTCAATTGTCAAAATTCCCTCATCTCTCCGCTGAACTTACAGATAAATTTCATCCGAAGAAATGTACAGTCTTTCCTTTCCACCCGTGGGATCCAAAAGAACATAGAAGACATGGGATTGTACTATGGGTTCCTCACACCATTGAAGAGCTTATCGAAACAGCAGCAGAGAAGCTAGATGTTTCTAGTGGTTGTTCTATTCTATCAGAGGATGCTGGTAAAATTACTGATGTGAACTTGATTGTGGATGGTCAAAAGCTGTATTTAGTCCCTGAAACACATTAA 2532 0.4135 MPANRVTEEEVRGESEENRKQISSFSRSSSSSSSTSDDREYEVQDLRDRLKSSRGSRFQLLEHELEELNQKKFSRHVLDGLRGFSKDFIIHPENRWHRAWRKFILLWAIYSSFFTPMEFGFFRGLDEDLFILDIIGQVAFLVDIVVQFFVAYRDSQTYRMIYKPAPIALRYLKSSFIFDLLGCMPWDIIYKASGRREGVRYLLWIRLYRVRKVTEFFQRLEKDIRINYMFTRIVKLIVVELYCTHTAACIFYYLATTLPPSREGYTWIGSLKMGDYSYMNFRDIDLWKRYTTSLYFAIVTMATVGYGDIHAVNMREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMADLLKYMNRNRLGREIREQIKGHMRLQYESSYTEPAVTQDLPISIRSKISQELYLPYIQKVPLFKNCSSEFINQIVIRLHEEFFLPGEVILEQGNVVDQLYFVCHGLLEEVGPCENGSEDTVSLLEPKSSFGHISILCNIPQPYTVRVCELCRLLRLDKQSFTDILDIYFYDGRKVLNNLLEGKDSSRGKQLESDITFHIGKQEAELALKLNNAAFNGDLNHLKGLIRAGADPNKTDYDGRSPLHLAASRGYEDITVFLLQEGVDINMRDNFGNTPLLEAVKNGNDRVASLLVGKGASMNIEDAGSVLCNAVARGDSDYLKRLLSYGMDPNTKDYDYRSPLHVAAAEGLFLMAKFLIEAGASVFIQDRWGNTPLDEAKMCGNKNLITLLEDAKSAQLSKFPHLSAELTDKFHPKKCTVFPFHPWDPKEHRRHGIVLWVPHTIEELIETAAEKLDVSSGCSILSEDAGKITDVNLIVDGQKLYLVPETH 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1354 843 MobiDBLite consensus disorder prediction 22 37 - -
Lele04g1354 843 Gene3D Jelly Rolls 388 551 IPR014710 -
Lele04g1354 843 Pfam Ion transport protein 97 343 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele04g1354 843 Gene3D - 552 659 IPR036770 -
Lele04g1354 843 Pfam Ankyrin repeats (many copies) 678 732 IPR002110 GO:0005515
Lele04g1354 843 PANTHER POTASSIUM CHANNEL AKT1 71 839 IPR045319 GO:0005249|GO:0006813
Lele04g1354 843 SMART cnmp_10 418 536 IPR000595 -
Lele04g1354 843 ProSiteProfiles Ankyrin repeat region circular profile. 627 658 - -
Lele04g1354 843 SUPERFAMILY Voltage-gated potassium channels 92 343 - -
Lele04g1354 843 CDD CAP_ED 418 532 IPR000595 -
Lele04g1354 843 PRINTS EAG/ELK/ERG potassium channel family signature 133 143 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele04g1354 843 PRINTS EAG/ELK/ERG potassium channel family signature 290 307 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele04g1354 843 PRINTS EAG/ELK/ERG potassium channel family signature 242 252 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele04g1354 843 PRINTS EAG/ELK/ERG potassium channel family signature 334 343 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele04g1354 843 FunFam Potassium channel KAT2 406 543 - -
Lele04g1354 843 FunFam Potassium channel SKOR 98 343 - -
Lele04g1354 843 PRINTS Ankyrin repeat signature 643 657 IPR002110 GO:0005515
Lele04g1354 843 PRINTS Ankyrin repeat signature 595 610 IPR002110 GO:0005515
Lele04g1354 843 ProSiteProfiles KHA domain profile. 770 843 IPR021789 -
Lele04g1354 843 SUPERFAMILY cAMP-binding domain-like 346 535 IPR018490 -
Lele04g1354 843 Pfam KHA, dimerisation domain of potassium ion channel 769 838 IPR021789 -
Lele04g1354 843 ProSiteProfiles Ankyrin repeat profile. 691 723 IPR002110 GO:0005515
Lele04g1354 843 Pfam Cyclic nucleotide-binding domain 438 522 IPR000595 -
Lele04g1354 843 SUPERFAMILY Ankyrin repeat 558 746 IPR036770 -
Lele04g1354 843 FunFam Gated outwardly-rectifying K+ channel 633 759 - -
Lele04g1354 843 MobiDBLite consensus disorder prediction 1 42 - -
Lele04g1354 843 ProSiteProfiles Ankyrin repeat region circular profile. 691 723 - -
Lele04g1354 843 SMART ANK_2a 594 623 IPR002110 GO:0005515
Lele04g1354 843 SMART ANK_2a 724 754 IPR002110 GO:0005515
Lele04g1354 843 SMART ANK_2a 627 656 IPR002110 GO:0005515
Lele04g1354 843 SMART ANK_2a 561 590 IPR002110 GO:0005515
Lele04g1354 843 SMART ANK_2a 691 720 IPR002110 GO:0005515
Lele04g1354 843 SMART ANK_2a 658 687 IPR002110 GO:0005515
Lele04g1354 843 ProSiteProfiles Ankyrin repeat profile. 627 659 IPR002110 GO:0005515
Lele04g1354 843 Gene3D - 100 344 - -
Lele04g1354 843 Gene3D - 660 754 IPR036770 -
Lele04g1354 843 ProSiteProfiles cAMP/cGMP binding motif profile. 418 538 IPR000595 -
Lele04g1354 843 MobiDBLite consensus disorder prediction 7 21 - -
Lele04g1354 843 Pfam Ankyrin repeats (3 copies) 567 658 IPR002110 GO:0005515
Lele04g1354 843 ProSiteProfiles Ankyrin repeat region circular profile. 594 626 - -
Lele04g1354 843 ProSiteProfiles Ankyrin repeat profile. 594 626 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1354 Lele-ChrLele04 19084857 19091768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1354 637 744 Ion Channels AT5G37500 33.333 8.56e-10 60.5