Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1352 ATGAAAAAGAGGAGTGGTTCTTCCTCCAGAAAAGAGGATCAGGTTGAACAAGTGGCCCAACGTAAGGTCCACAAGCCCAGGTGGCTCGAGCCTATTCTGAAGAAAACTTTCTTTGATTCTTGTGCAGCTCATCCTATGTACAAGAATGAACTGAACAAATACTGTATGACCTGCAACAAGTCTGCTTGCCAATATTGTGTGTCTGAAGGCATTCATCGATGCCACAAAATGCTTAACATTTATAAACATGTCTACAAATATGTTGTCGCCTTAGCTGCTGTTGAAAAGCATATTGACTGTTCAAAAATTCAGACCTACAAATGCAACAAGCGATTGGTTATTGCTCTGAATCCTCTTCCCCATGGCGGTCTGGCATCATACGCTGAGCCATTATGTGAGATCTGTGCTAGAAAGCTGACTGACCCTCATTTGTATCGTTACTGCTCCATTTCATGCAAGGTTCAAGCTGTTTTAAGGAAGCCCAATGACTCACTTCCTCCCTTTATTACCATCCAGCGTCCTTCTAAGGGAAAGAAAGGGGAAACTTCTGAGCCTCCGAAGCCTACACACAAAAGAAAGGGAACACCTCGTAGGGCTCCCTTCTTCTGA 609 0.4384 MKKRSGSSSRKEDQVEQVAQRKVHKPRWLEPILKKTFFDSCAAHPMYKNELNKYCMTCNKSACQYCVSEGIHRCHKMLNIYKHVYKYVVALAAVEKHIDCSKIQTYKCNKRLVIALNPLPHGGLASYAEPLCEICARKLTDPHLYRYCSISCKVQAVLRKPNDSLPPFITIQRPSKGKKGETSEPPKPTHKRKGTPRRAPFF 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1352 202 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 20 201 - -
Lele04g1352 202 ProSiteProfiles Zinc finger B-box type profile. 41 80 IPR000315 GO:0008270
Lele04g1352 202 CDD Bbox2 41 80 - -
Lele04g1352 202 Pfam PLATZ transcription factor 82 154 IPR006734 -
Lele04g1352 202 MobiDBLite consensus disorder prediction 165 202 - -
Lele04g1352 202 SUPERFAMILY B-box zinc-binding domain 40 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1352 Lele-ChrLele04 19076901 19079518 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele04g1352 PLATZ 1.5e-18 No_clan