Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1348 ATGAAAGCAAACTTTGATCTTGAAGTGGAGGCCTCTGCAGAAAGTGAATTTGAAGTCAGCAGCCAGGTTGCTTCCAATATATCCACTCAAGAAACTATTGCAGGTCCTTGTATTGATCAAAACCTGTCCAATTCTGCCACTCCAGGAAATCCAACAGAGATAATTGATGGAAATTCAAATCCCGTTTCACTTGACCTGACTCTCAACTCAAATAAGAATGAGTTAGCAGGGGCAAAGGATTCCGTACGACTCTCAGTATCAAGCACTAGTGAGAGTAGCAATGAACCTGCTTCTCAAACTACTGAAGCGACCATCACCCGAGTTTTCGCGTGCAATTACTGTCAACGCAAGTTCTTCAGCTCGCAGGCTCTGGGGGGCCACCAAAATGCACACAAGAGAGAAAGATCATTGGCAAAGCATGCTATGAGGATGGGTTTTTTCTCTGAGAGGTATGCAAATCTTGCATCTCTCCCTCTTCATGGTTCTTCCAGATCATTGGGAATAAAAACTCACTCTTCACAGCACTATGGCTTTTCACCAACAGTGAAGGTTCAAGAGATGAAAAACAATGCAAAATATGAGATAAGATATATTGGTCAGCCAATTTTCTTGAATGCTAATCAACCTGGACTTGTTTGGCCTGGTAGTTTCCGACAGAATGCAAACATAGGTGATGATCATAAGAATTTGCCGCTGACCGAAAGTTCTGGTTTAAATTTTAGGGAGGTGAATCCTCCAGTAGACATAGAGAAGCCCACCCCAGATTTGACATTAAAACTTTGA 783 0.424 MKANFDLEVEASAESEFEVSSQVASNISTQETIAGPCIDQNLSNSATPGNPTEIIDGNSNPVSLDLTLNSNKNELAGAKDSVRLSVSSTSESSNEPASQTTEATITRVFACNYCQRKFFSSQALGGHQNAHKRERSLAKHAMRMGFFSERYANLASLPLHGSSRSLGIKTHSSQHYGFSPTVKVQEMKNNAKYEIRYIGQPIFLNANQPGLVWPGSFRQNANIGDDHKNLPLTESSGLNFREVNPPVDIEKPTPDLTLKL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1348 260 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 57 193 IPR044246 GO:0009788
Lele04g1348 260 ProSitePatterns Zinc finger C2H2 type domain signature. 111 131 IPR013087 -
Lele04g1348 260 Gene3D Classic Zinc Finger 85 153 - -
Lele04g1348 260 MobiDBLite consensus disorder prediction 39 58 - -
Lele04g1348 260 ProSiteProfiles Zinc finger C2H2 type domain profile. 109 136 IPR013087 -
Lele04g1348 260 SUPERFAMILY beta-beta-alpha zinc fingers 107 136 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1348 Lele-ChrLele04 19055425 19056207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1348 91 260 C2H2 Transcription Factor Family AT1G66140 44.162 1.44e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele04g1348 None None None