Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1346 ATGCCCTTACAAGGGATTGCGATCGAGCCCAGCAGTTCCACATGTTCGCCTCCTGATCTTTCCCTTCACATAAGCCCTCCAACTTCTTCTTCTAATTTGGTAACTCAAGCTCGAACCGAGCTCTCTCTAGCCGCCAATTTCTGCACAGACCAACTTCCTCATCATCATTCTTATCATCTTCCTCATCACAATCACAAACCCACCTCAAACTCTCACTTCAACCACCACATGAATTCGTCGTCGTCGTCAGACGTCGGCGTAATGAGACCGATCAAGGGGATCCCGGTGTATCATCATCATTATCAGAAGATGTGGTTGCGTCATCATCATCCCTTGCCCTCTAACAGTTCTTCCCCTTCTTGGGCTTATAATACGATGGGAGTCTCCGGTTTGGATAATCCGATATTTATGCCTAAACTACCCTCCAAGAGAAGCATGAGAGCTCCTAGAATGCGTTGGACCACCACCCTCCATGCCAGATTCGTTCACGCCGTTCAACTCCTTGGCGGCCATGAAAGAGCTACACCAAAGTCGGTTCTGGAGCTGATGGATGTGAAAGATCTCACCTTAGCTCATGTTAAAAGCCACTTGCAGATGTATCGAACAGTCAAGACCACTGACAAGCCTGCTGCTTCCTCAGATGGATCTGGTGAAGATGACTTGTCTCCCGGCGGTGCCGGCAACGCCGATCGTGGAGGTCTTCGTCAGTTTTCCGATCAGAGAGGCCGAGCAGATCGGTCTGCGCAACAGCAAGACATAGACCATCCTACTTCTACTACTCTATGGAGTAATTCTTCAAGCAGCAGAGAGGCATGGGCACAGAATAATAATTCTTATGATGATATGGATGCTCTCAGAGAACCTAAACCAGTGACAAGAGTAGGGCATCAAACTCAGGAATGTAATTCAAGCGAAGCAAGATTACTAGTGAAGAACAATTTGCCAGATGTGAATATAGAATGCAAGAATCCATGCTTGGAGTTTACATTGGGAAGACCAGATTGGAATGGCAAGGGACAACCCTAA 1026 0.4747 MPLQGIAIEPSSSTCSPPDLSLHISPPTSSSNLVTQARTELSLAANFCTDQLPHHHSYHLPHHNHKPTSNSHFNHHMNSSSSSDVGVMRPIKGIPVYHHHYQKMWLRHHHPLPSNSSSPSWAYNTMGVSGLDNPIFMPKLPSKRSMRAPRMRWTTTLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSDGSGEDDLSPGGAGNADRGGLRQFSDQRGRADRSAQQQDIDHPTSTTLWSNSSSSREAWAQNNNSYDDMDALREPKPVTRVGHQTQECNSSEARLLVKNNLPDVNIECKNPCLEFTLGRPDWNGKGQP 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1346 341 Gene3D - 148 205 - -
Lele04g1346 341 FunFam Myb family transcription factor 147 205 - -
Lele04g1346 341 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 338 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lele04g1346 341 MobiDBLite consensus disorder prediction 1 33 - -
Lele04g1346 341 MobiDBLite consensus disorder prediction 251 269 - -
Lele04g1346 341 MobiDBLite consensus disorder prediction 7 33 - -
Lele04g1346 341 Pfam Myb-like DNA-binding domain 150 201 IPR001005 -
Lele04g1346 341 MobiDBLite consensus disorder prediction 236 250 - -
Lele04g1346 341 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 149 202 IPR006447 GO:0003677
Lele04g1346 341 MobiDBLite consensus disorder prediction 205 269 - -
Lele04g1346 341 SUPERFAMILY Homeodomain-like 146 202 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1346 Lele-ChrLele04 19046311 19049076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1346 1 338 G2-like Transcription Factor Family AT5G16560 39.524 2.57e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele04g1346 Myb_DNA-binding 1.3e-05 CL0123