Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele04g1337 | ATGCTCGGCGCATTGGGATGTGTGTTCCCTGAAATCCTGGAGAGGAACGGCGTCAAGTTTGGCGAGGCAGTTTGGTTCAAGGCCGGTGCCCAGATCTTCTCCGAGGGCGGCCTTGATTATCTCGGCAACCCTAACCTCATCCACGCTCAGAGCATCCTCGCCATCTGGGCTTGCCAGGTTGTGCTGATGGGATTCGTGGAAGGGTACAGGGTTGGCGGAGGGCCACTTGGAGAGGGGCTTGACCCGATCTACCCGGGTGGTGCTTTTGACCCACTGGGTCTGGCGGATGACCCGGATGCATTTGCAGAGTTGAAGGTGAAGGAAATCAAGAACGGGCGATTGGCGATGTTCTCTATGTTTGGGTTCTTCGTTCAGGCGATTGTGACGGGGAAGGGCCCCATTCAGAACCTTGTTGATCATGTTGCCGACCCCGTTGCCAACAATGCATGGGCTTATGCCACTAACTTCGTCCCTGGACAATGA | 483 | 0.5611 | MLGALGCVFPEILERNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLVDHVADPVANNAWAYATNFVPGQ | 160 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele04g1337 | 160 | Gene3D | Chlorophyll a/b binding protein domain | 1 | 153 | - | - | |
| Lele04g1337 | 160 | SUPERFAMILY | Chlorophyll a-b binding protein | 1 | 157 | - | - | |
| Lele04g1337 | 160 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 159 | IPR001344 | GO:0009765|GO:0016020 | |
| Lele04g1337 | 160 | Pfam | Chlorophyll A-B binding protein | 1 | 126 | IPR022796 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele04g1337 | Lele-ChrLele04 | 18980511 | 18981110 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele04g1337 | 1 | 160 | Chloroplast and Mitochondria Gene Families | AT3G27690 | 90.000 | 8.87e-108 | 307 |