Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1336 ATGTCCTCGCAGCCAAACGATTTTGTCGAAGGTGATGACCATACTGCAATCAATGCTCCCTTGCTCGTGGGTAACAAGTACCGTCGGCTCTGGCGCCGGAGCTTATACATTCGAATCTTCATCTCTCTCACACGAACAACACTAACTACCACTGCGACACTCGAATCTGAACAATTACCTCTTCACACCCCATTATCCTGCTCATCATCTCTTCCCACGAGAACTTCCTCGGCTAAATCATCTTGTACGATTGAAGTTGCCTCTGATAACGAAGAGGAGGGTATTGTAGAACAGCGCATCAAGAACGATATTGCTCGTATTGTGAAGGAAAAGGACTTGGAATCGCTTCGTGAGCTCGGGGGAGTCGACCGTATTCGCTCAGTTCTTGGTCGTTGTCAATCAGAGGTATTTTGGAACCATCGACTCGAAATTATTGTGATGCATCGTGAAACTGTTAAGGAGGAATCTGTGGTATTGAAGCCTATTTTGGACGGGGACACAAGGTCGTTTCGTCGCCTGTTATCTGTTCTTTCTCTGTATCGGGCCTATGGCTTTGTTATTGTTGATTTCAAAAGCCTAAGTTGTGGTTTCATTAGCTTGATTTGTGCTCTGTTGTCCTTGACTATAGAGATCAAGCAGGAAGGACCTAAACATGGCTGGCATGATACTGCTGCCATACTTGTTGCCATAATCATGATTATCTCTTTCTCTTCAGTGGCAAACTTTTGGCGTGAAAGAAAGATGCTAAAATTATCAGAGAAGAAGGGCGAGTTGAAAGTTATGGTTGGTGATACAGTGCGTCTTAAGAAGGGTGACGAGGTTCCAGCTGATGGTTTGCTTCTAAATAATGAAAACTCTGTGTTAGATGAGACACAGGATCCATTTCTCTTATTCGGCTCAAAAGTATCTTTTGAGGGTGAAACTTTGATGCTTGTAACATCAGTAAGAAACAAAAGATCAGTTGAGATGCAGAATTCAGCGGCAAATAATCCTGAAAAGATTATGCTGTTGGAAAGTCGAATTGAGAAGCCGATTTCTTTCATTGACAAAGTTTCCCCTCTTATCTCTGCATTGGTTATGCTTGTGGTGCTCATTCGCCTGCTTGGCAAGGAAAATGGGGACAACAGTGGGTTACCAGAAATTAAGGGTAAGGTTTCAGTTGGCTTCGTGATGGAATTGATGAAGAGAATTTTCTTGAAACCACTAGGAAAAGTTTCCATTTTAACTAGCCTTATAACTGTTGTAATAATAAGTATGCAGCATGGGGTACCACTTATGGTTACAATTTCTCTCAAATACCAAATGGACAAGGTGATATCAAACCAAGTTGCAGATCTCCATGATTTATCGTCTTGTGCAACAATGGGACTGGTTACAGTCATCTGCATCGACGCATCTGGTGGTCTAATGTCTAAACTGATGGAGGTTAGTAGAATTCGGATTGGGGAGAGAGATATCAGCAATGACGTGACATCAGAAATTAGTTCAGATGTGATTGACATACTTCAGCGAGGAGCCAGCGTATCTGTTCTTGCTCCTGAGTTTATTCTTTCTCCAGTGTCCAATTCACTTATGTCTTGGGCAAAAACCACTTGGGGCATGAACGGAGAATCTTTTGGTGAGAAACTTACCATTCTTCAGCATAGAAAACAAAATTATAATGGAAATGGAGTTTTAGTGAAAGTTGGAGACCATGAAGATCTGCACTTGCACTGGAGTGGGGCAGCATCTACAATTCTGGAAATGTGTTCCCATTATTGTGATAGTAATGGGGATTGCCATGGCATAACAAATCAGAAAATCAATTTTGGATCGGTCATTAAAGAAATGGAGGATAGCGGCCTTGAGCCTGTTGCACTTGCTTATAAGACAGAGGCTCAAGAACTTCAACAAGATGGACTAATCTTGCTAGCTCTAATAGGTCTGAAACACACGAGCCTTGACGAGGCAAAGTTAGCATTGGAACGCCTAAAAAATGATGGAATCAAGATCAAATTAGTGTCAGGGCAAGACATAATGGCGGTGAAAGCCCTAGCTTGGGAACTAGGAATAGAAGTTCCCGGTGAAGATGGTGTTATTCCTGAAGGAAAAGAAATTCAGAATTTGAATAGCACAGCCAGGTTAAAGAAGTTGGATGAAGCACTGGTAATGGGAGGTTTCCTTCCTGATGACAAGGTTCTCATGATTAAGTGTTTGCAAGATGAAGGGGATCATGTGGTTGCATTCTTTGGAGGGTTGACAGTAAGTGATGCTGCAGTTCGAGAGGCAGCTGATATAGTGATAGATGCTAAGTCTCGGCTGAATAACCCAAAATCTGATATGGAGAGTTCGAATATATCTGTTGAATGTTTCGGTGCAATAACTACAATTGTGAGGGCTGGCAGATGTCAATATCGCAATATTCAAAAGTTCATTCAACTTCAGCTCACAGCTAGCTCATCTGGGTTATTCATAACCTTGATCACAACAATGTGCACCGGACAATCTCCCCTAACGGCCATCCAATTGATTTGGGTGAGCGTGATGATGTGCCTTTTGGGAGGCCTAATGATGTTAATTATCGAGGAGGAGGATCAGCATGCCATTGCCAGCCAACCAAATGACAGGAAGCAATCACTTATAACCCAAGAAATCTGGAAAGACATAGCTATTGAAGTCTTGTATCAGGCTTCTGTTTCTATGATATTTCTCTTTGGAGGAAAAGTTACGGACAGCACAGAACAAGTTAGGAAGACTATGATCTTCAACACGTTCATGCTATGTCAGGTCTTCAATCAGCTTAACGTCGTCTTACGCCTGGTGAAGAAGAGAGTTTTCAAGTTGGTTCTTCTGAGCTACTGCTGTTTCTTGGTTGCGTTAGGGGTTTGCCTGATTATGCAGGTTCTGGTGATTCAACATGCAAAGAGCCTAGCAGATTGCTTGAGGCTAAATGCAACTCAATGGGCTATCTGTATCGTGGTTAGTGCTCTTTCATGGGTAATTGAGTGGCCATTCAACAAGATTCTTACTTGGATATTTCGTCATTTTCATCCCTCTGCTGAGCTGTACAAATCCTCATCCACAATATCACACGGAATCATCCTTTCTTCTATAAACTTTGCTTTCAACGCTCCCTTCTCATCAACAACAACACACCACATCAGCAGAGCATCAGATCAATATCTTCGTCGCCATGGCCACCTCTGCTATCCAGCAATCTGCATTCGTCGGACAGACCGCATTGAAGCAGGCAAACGAGCTCGTCCGCAAGGCCGGGGCCTCCGGCAATGGCCGCTTCACCATGCGCCGCACCGTCAAGAGTGCTCCTCAGAGCATCTGGTATGGCCCTGA 3330 0.4327 MSSQPNDFVEGDDHTAINAPLLVGNKYRRLWRRSLYIRIFISLTRTTLTTTATLESEQLPLHTPLSCSSSLPTRTSSAKSSCTIEVASDNEEEGIVEQRIKNDIARIVKEKDLESLRELGGVDRIRSVLGRCQSEVFWNHRLEIIVMHRETVKEESVVLKPILDGDTRSFRRLLSVLSLYRAYGFVIVDFKSLSCGFISLICALLSLTIEIKQEGPKHGWHDTAAILVAIIMIISFSSVANFWRERKMLKLSEKKGELKVMVGDTVRLKKGDEVPADGLLLNNENSVLDETQDPFLLFGSKVSFEGETLMLVTSVRNKRSVEMQNSAANNPEKIMLLESRIEKPISFIDKVSPLISALVMLVVLIRLLGKENGDNSGLPEIKGKVSVGFVMELMKRIFLKPLGKVSILTSLITVVIISMQHGVPLMVTISLKYQMDKVISNQVADLHDLSSCATMGLVTVICIDASGGLMSKLMEVSRIRIGERDISNDVTSEISSDVIDILQRGASVSVLAPEFILSPVSNSLMSWAKTTWGMNGESFGEKLTILQHRKQNYNGNGVLVKVGDHEDLHLHWSGAASTILEMCSHYCDSNGDCHGITNQKINFGSVIKEMEDSGLEPVALAYKTEAQELQQDGLILLALIGLKHTSLDEAKLALERLKNDGIKIKLVSGQDIMAVKALAWELGIEVPGEDGVIPEGKEIQNLNSTARLKKLDEALVMGGFLPDDKVLMIKCLQDEGDHVVAFFGGLTVSDAAVREAADIVIDAKSRLNNPKSDMESSNISVECFGAITTIVRAGRCQYRNIQKFIQLQLTASSSGLFITLITTMCTGQSPLTAIQLIWVSVMMCLLGGLMMLIIEEEDQHAIASQPNDRKQSLITQEIWKDIAIEVLYQASVSMIFLFGGKVTDSTEQVRKTMIFNTFMLCQVFNQLNVVLRLVKKRVFKLVLLSYCCFLVALGVCLIMQVLVIQHAKSLADCLRLNATQWAICIVVSALSWVIEWPFNKILTWIFRHFHPSAELYKSSSTISHGIILSSINFAFNAPFSSTTTHHISRASDQYLRRHGHLCYPAICIRRTDRIEAGKRARPQGRGLRQWPLHHAPHRQECSSEHLVWP 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1336 1109 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 559 642 IPR023299 GO:0000166
Lele04g1336 1109 SUPERFAMILY Calcium ATPase, transduction domain A 259 314 IPR008250 -
Lele04g1336 1109 Gene3D - 277 473 - -
Lele04g1336 1109 PANTHER CATION TRANSPORTING ATPASE 185 1000 - -
Lele04g1336 1109 Pfam Cation transporting ATPase, C-terminus 829 995 IPR006068 -
Lele04g1336 1109 Gene3D - 548 638 IPR023299 GO:0000166
Lele04g1336 1109 Gene3D - 781 1009 - -
Lele04g1336 1109 SUPERFAMILY Calcium ATPase, transmembrane domain M 200 1006 IPR023298 -
Lele04g1336 1109 SUPERFAMILY HAD-like 635 761 IPR036412 -
Lele04g1336 1109 Gene3D - 639 780 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1336 Lele-ChrLele04 18974489 18980353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1336 101 1023 Primary Pumps ATPases AT3G63380 33.165 1.56e-133 429