Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1332 ATGAAAACGTGTATAGTAAATGTGATGAATAGAAGACCAAAAGAAATATATTGCTTCTTCCACGTAGGTGGGAAGTTTGTCACTAATGAAGGGAGGATTGAATATGTTGGTGGGAGAGCAAATGGAACAATGGTAAGAGAAGGAATGTCACTTATTGAGCTTAGAAGAACAATATCCTCATTTCTTGGTGTTCAACGTGAAGGATTTCGATTGAAGTGCCCATTGTTAGAAGTAGATCAAAACACTGTTATAGACATAACAGATGATGAAGGAGTGCAACATCTAGTACAATTCAATAATAATTGTGCACATTTATATATAGTTGAAGATGTAAGTGAGTTGATAGATGAAGGACAACCCATGATGATTTCACAATGTATTACTCCACAGTTGGAAATGATTATGATAGACGAGGATGTTTTGGATAAAGAAAGTAGTCTATTTCCTGATGAATGTAGCGAGCTAAAATCTGTTGGTGTTGTAGATGATATACTGATGAAACCTCTTTGGTTTAGGGCTTTGATTCACTTCTACAGAGAAGCCCTTGGAAGTGAGAAGAAGCAAATAATTAGAAAGAAAGAACCAAACCTTGGGAACTTGTTAAGACAGAAACATATTTTGGTGGTTGACGATAATGCAGTGAACAGAAAAGTAGCAGAAGGTGTGCTACGAAGATACGGGGCAAAAGTAACCTGTGTGGAGGGCGGCAGGGCTGCCTTAAAGATGCTTAAGCCACCACATAGTTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGACGGATTTGAAGTGACCAGACAAATCCGCTGTCTGGAGAAAGGTTTAAATGAAAAAATTGCGCATGGTGAAGCATTAACAGAGATGTTGGGTAATGTGGCTCATTGGCACATGCTAATATTGGCTATGACAGCTGATGTAACTCAAGCTTCAATCGAAGAGTGCAATAGGTGTGCGATGGATGACTATGTGTCAAAGCCATTTGAAGAAGAACAGCTCCATGAGGCAGTGGCACGTTGCTTTGGGTCTGTTTGA 1038 0.3931 MKTCIVNVMNRRPKEIYCFFHVGGKFVTNEGRIEYVGGRANGTMVREGMSLIELRRTISSFLGVQREGFRLKCPLLEVDQNTVIDITDDEGVQHLVQFNNNCAHLYIVEDVSELIDEGQPMMISQCITPQLEMIMIDEDVLDKESSLFPDECSELKSVGVVDDILMKPLWFRALIHFYREALGSEKKQIIRKKEPNLGNLLRQKHILVVDDNAVNRKVAEGVLRRYGAKVTCVEGGRAALKMLKPPHSFDACFMDLQMPEMDGFEVTRQIRCLEKGLNEKIAHGEALTEMLGNVAHWHMLILAMTADVTQASIEECNRCAMDDYVSKPFEEEQLHEAVARCFGSV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1332 345 SUPERFAMILY CheY-like 202 342 IPR011006 -
Lele04g1332 345 ProSiteProfiles Response regulatory domain profile. 205 342 IPR001789 GO:0000160
Lele04g1332 345 PANTHER TWO-COMPONENT HISTIDINE KINASE 107 336 - -
Lele04g1332 345 Pfam Response regulator receiver domain 206 274 IPR001789 GO:0000160
Lele04g1332 345 Gene3D - 199 344 - -
Lele04g1332 345 CDD REC_hyHK_CKI1_RcsC-like 206 338 - -
Lele04g1332 345 SMART REC_2 204 338 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1332 Lele-ChrLele04 18938258 18942235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1332 121 342 Miscellaneous Gene Families AT5G35750 52.400 3.34e-74 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele04g1332 Response_reg 3.3e-14 CL0304