Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1330 ATGGTTTCTTCAGACAAAAGTGCTGATCGCAATGTTTCTTCTGATAAATTGCATCAGAGGCTGAGTTCTCAAAGCGATATTACTGTCTCACAAGAGACTTCTGATGATAAAATTGATTCATCCAACCCAGAGGGAGCAAGAAGAATTCCTTCTGTTGCAGCCGAGAAAGAAGTGCAGGATTCTGATGCTACACCCGATGCACTGCAATCAGATCAAGAAGGAAGTGCATGTACCTCACCACTTCAAAGACCTTTGCAGAGTCCTAGTACTGATCAGCGTCCATTGCAATCCAGTGAGGAAAGTCCCTCTATAATATGTGAAAAGAGTTCAAAAGACAGTGTAACCGAAATAGTAGTGTGGGATTCTGATGCTACTGCCAATGCACGGAAATCAGAGCAACTCACGTTGTCTTTATCGCATGAGAAACCCTTGCAAAATCCTAGTACCATTCCACGCACATTACATTGTGGTCAGGATGGTCCCTCTATAGCACGTGAAGAAGTCTCAAAGGATGGATATAATTGGCGAAAATATGGCCAGAAAAATGTGAAGGGCAATGAATATATAAGGAGCTATTACAAGTGCACACATCCCAACTGCCCAGCGAAGAAGCAATTGGAACAGTCAAATAATGGACAGATTACAGATACCATTTGCATCGGTCAGCATAATCATCCCCAAGTGAACAGTTCACGACCTGTCAAAGAAAAATCAAACGCGCCCTCTCTAGCCGACATGAAAGACAAAACATCCATTGAGCATGGATGTGTGTCTCAACAGATCAAGTCTCTAGAAACTCATCCAGTTTCAACAGTTTCCACAATTAACAAGGTCAAAGCTGGACCTTTACAGTCGATTAGAACAAGGGATGTGGTTCTTGCCAATGACGATCCTGATTTAAAACGCCTGAAGAAAAACAATAGTAATGCTGATGGCCCTGGGGTTGAGAGGTCAGTTGGTGAATCTCGTCTTGTTGTTCAGACTTCAAGTGAGGTTGATTTTATTAATGATGGGTACCGTTGGCGCAAGTATGGGCAGAAACTAGTAAAAGGAAATCCAAATCCAAGAAGCTATTACCGGTGCTCAAGTCCTGGATGCCCTGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATCAAAAAATTGTGATAACCACCTATGAGGGACATCATTATCATGAAAGCCCCTCTGGAAGGACTGTTATTCATAACGGAGCAGCAGATACTTCCACAACAATCATCAACAATGACTTGGGAACCAAATCAGGGGAAAACTCTGTTTGTGTCCATCCAGCAGAACAACAGATTTGCTTGTACTTAGAAAGCAGGTCGCAGGAGCAACCAAATGGTGAGAAAATTGCTAAACCAAAGACTTGTGATAGGGATGAATCTCAAGGGATTGCTACTCGAGTCTCCGAAAGTCCTGCAAGTGAGAAAGAACAAAATGGCGACGTGGGTGCGGGAAATGATTCAGGCAGCCATGGCACCACATGCCATTCAGGTTCTGAGCCTCCATGTGGACTAAATAAACAGCAGAAAGATGAGGTAAGAGCCATATCAGAAGAAAGTAAGTTAAACAAGGAATCTGAACCTGATGCAGAACCTGTCCCAAGCTAA 1614 0.4325 MVSSDKSADRNVSSDKLHQRLSSQSDITVSQETSDDKIDSSNPEGARRIPSVAAEKEVQDSDATPDALQSDQEGSACTSPLQRPLQSPSTDQRPLQSSEESPSIICEKSSKDSVTEIVVWDSDATANARKSEQLTLSLSHEKPLQNPSTIPRTLHCGQDGPSIAREEVSKDGYNWRKYGQKNVKGNEYIRSYYKCTHPNCPAKKQLEQSNNGQITDTICIGQHNHPQVNSSRPVKEKSNAPSLADMKDKTSIEHGCVSQQIKSLETHPVSTVSTINKVKAGPLQSIRTRDVVLANDDPDLKRLKKNNSNADGPGVERSVGESRLVVQTSSEVDFINDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDQKIVITTYEGHHYHESPSGRTVIHNGAADTSTTIINNDLGTKSGENSVCVHPAEQQICLYLESRSQEQPNGEKIAKPKTCDRDESQGIATRVSESPASEKEQNGDVGAGNDSGSHGTTCHSGSEPPCGLNKQQKDEVRAISEESKLNKESEPDAEPVPS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1330 537 MobiDBLite consensus disorder prediction 63 108 - -
Lele04g1330 537 Gene3D WRKY domain 322 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1330 537 Pfam WRKY DNA -binding domain 170 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1330 537 Pfam WRKY DNA -binding domain 336 392 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1330 537 MobiDBLite consensus disorder prediction 300 320 - -
Lele04g1330 537 SMART WRKY_cls 169 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1330 537 SMART WRKY_cls 335 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1330 537 SUPERFAMILY WRKY DNA-binding domain 166 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1330 537 MobiDBLite consensus disorder prediction 467 506 - -
Lele04g1330 537 MobiDBLite consensus disorder prediction 17 36 - -
Lele04g1330 537 MobiDBLite consensus disorder prediction 447 466 - -
Lele04g1330 537 ProSiteProfiles WRKY domain profile. 164 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1330 537 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 94 411 IPR044810 GO:0003700
Lele04g1330 537 FunFam WRKY transcription factor 57 321 395 - -
Lele04g1330 537 MobiDBLite consensus disorder prediction 1 108 - -
Lele04g1330 537 FunFam WRKY transcription factor 160 229 - -
Lele04g1330 537 ProSiteProfiles WRKY domain profile. 330 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1330 537 Gene3D WRKY domain 162 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1330 537 MobiDBLite consensus disorder prediction 513 530 - -
Lele04g1330 537 MobiDBLite consensus disorder prediction 443 537 - -
Lele04g1330 537 SUPERFAMILY WRKY DNA-binding domain 327 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1330 Lele-ChrLele04 18918244 18921263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1330 138 408 WRKY Transcription Factor Family AT2G04880 49.648 5.37e-79 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele04g1330 WRKY 8.1e-25 CL0274