Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1328 ATGCTTCTATCTCCAGGCCACTCCCCTCGCCATATCTCTTCGCCCTCTCCTTCTCTGTCCCAAGTTTCTGTGCAAAATCCCAATGATTCATCCTCTGAAATCGCTCCTAAGATCCCCCGCAAGAACCAAGCCGTCCTCGATGAGGACACGTATATTGCCGCCATCGAGAAGATCATCGAGCGCGACTTCTTCCCTGATATCTCCAAGCTTAGGGATCGCCTTGACTGGCTCGAAGCAATCAAGACTGGCGATCCGGTTCAGATTCGTGATGCCCAGTTGAAGATCATGGAACGCCGTGGACGGAAGGTAAATAATTCTAACACTGATGGTAGAACGCAAACTCCCGGTTCCACTTTTGCTAGAAATTTTACTCCTTTTGATGAATTTGATGGCAAAACCCCGAGAACACCCGGTTTTACGAATGGGGAAGCTTCTGTGGGTGGTCATACGAGTGAGGAAGATGGTGGGGTGAATACATCGCTTAGTCTGGATCATTTTCTTAATAGGTATACGAGTGAGGACAATTATAGTTTTTCTAAGATTTTGGAGAAAGTTAATAGGAAGAGGAAGGAGAGATTTGGGTACCTGACAGAAGGGGAGAAGGAACATGTTGCAGCTATCGAAGATGCAAAGAGGGATAGGATAACAGATGGATATGGGACGTCTGATCAGCCCCCAAGTACCTTAGAGGGGTGGAACTATACAGCAAAAAATCTGTTGATGTATCATCCAACTGATCGTGGGGAAGCCCCCCTAACTGAAGAGGAAAGGGCTGTAAGAATGAAAGGCCTGACAAAGGAGATTAATCGTTCAAGTACAAGATTTCATTGTAAAATGATGGAATCTAAGCCAAATGACGATGGAACTGTTGAGGTGCTTTATACCCCTGTTGCTGGTGCAACTCCAGTTCCCATATCAGATAGAGAAGGGGAGAAATTAAAGAAGTATGATTTGGAAGATTTAAGGAAGACTCCAAATCCATTCTATGTTGAATCCGGAAAGAAAGCTGATAATGGTTATAGCTTTGTGAGGACACCGTCTCCTGCTCCAGGAATCAATGAATCCCCATTTATTACTTGGGGTGAAATTGAAGGGACCCCGTTGAGGTTGGATCCAGAGGATACGCCAATTGATATTGGTGGTAGTGCTGATGGACCTCATTATAAGATTCCTTCTGCACCTGCAAGAGATGAAAAGGCTCACTCGCTTTCTAGGGAGGCTGCACGTAAGCTGAGGGAAAGGTCAAAGATGTTTCATAAGCCTCCATTGCCATCACCAGTTAGAGGTGGAAGTGCTAGTCCAAGCGGTCAGACTCTTTCTCCTGCTGCACAGAAGTTTGTGAGGAATGCTATTGCCAAATCCTCATCCTCTGTTGATGAAACACTTCGCGCTAGTTACCGTGGTTCTAGTCCTGCTTTGAATACTCCTAGAAGTGTTAGAAGTGTATCAAGGTTCGGTAGGGATGTAAGCATGGGTTCTAGGTCTCCATCAGTTAGAGAGGGGTCAAATGCCCCTTGGATTAAATTTGCTGAGCAATTCAGCCACAGAATTCCGGTTCTTCAGCTACGTACGATCTTCCTTTCACTGGATTGGTTATTGAAAATGCCAGCTGAGAACTCATACTCGAACACTTCTGATCTCATAGAACCATTTGCTGAAGTTGACCCAACTGGTAGGTTTGGGCGGTACCATGATCTGCTTGGCAGTGGTGCTGTGAAAAAGGTTTATAGGGCCTTTGATCAAGAAGAAGGCATAGAGGTAGCCTGGAATCAGGTGCGACTGAGGAATTTTAGTGAAGATCCTGTGCTCTTAAATCGTCTTCACTCTGAGGTTGAGTTGCTTAGAACATTGAAGAACAAATATATCATTGTTTGTTATAGTGTTTGGAAAGATGAAGAGCGGAACAATTTAAATTTTATTACTGAGGTATGCACTTCTGGGAATCTGAGGGCCTACAGGAAGAAACATCGTCATGTATCCATTAAGGCATTGAAGAAGTGGTCAAAACAAGTTCTTGAAGGATTGGAATATCTACATACACATGAACCATGCATTATCCACAGAGATCTTAATTGTAGTAACATTTTCATTAATGGGAATATTGGCCAGGTGAAAATTGGTGATCTTGGACTGGCTGCAATAGTTGGAAAGAGTCATGCAGCACATTCAATTATAGGGACACCAGAATATATGGCTCCAGAGCTGTATGAGGAGGATTACACTGAGATGGTGGACATATACTCTTTTGGAATGTGTTTGCTTGAGATGGTCACAATGGAGATACCATACAGTGAATGTGACAGTATTGCCAAGATATACAAGAAGGTAACAACAGGAATAAAGCCGCAGGCTCTAAACAAAGTCACTAACGCAGAGTTGAAGGCATTCATTGAGAAGTGCATTGCTCAACCAAGGGCACGACCTTCAGCCACAGATCTCCTCAAGGATCCTTTCTTTACTGAACTCAACAACGACCAGTTAGGACCAAATCCAGACCCAACTGGTTAA 2508 0.4402 MLLSPGHSPRHISSPSPSLSQVSVQNPNDSSSEIAPKIPRKNQAVLDEDTYIAAIEKIIERDFFPDISKLRDRLDWLEAIKTGDPVQIRDAQLKIMERRGRKVNNSNTDGRTQTPGSTFARNFTPFDEFDGKTPRTPGFTNGEASVGGHTSEEDGGVNTSLSLDHFLNRYTSEDNYSFSKILEKVNRKRKERFGYLTEGEKEHVAAIEDAKRDRITDGYGTSDQPPSTLEGWNYTAKNLLMYHPTDRGEAPLTEEERAVRMKGLTKEINRSSTRFHCKMMESKPNDDGTVEVLYTPVAGATPVPISDREGEKLKKYDLEDLRKTPNPFYVESGKKADNGYSFVRTPSPAPGINESPFITWGEIEGTPLRLDPEDTPIDIGGSADGPHYKIPSAPARDEKAHSLSREAARKLRERSKMFHKPPLPSPVRGGSASPSGQTLSPAAQKFVRNAIAKSSSSVDETLRASYRGSSPALNTPRSVRSVSRFGRDVSMGSRSPSVREGSNAPWIKFAEQFSHRIPVLQLRTIFLSLDWLLKMPAENSYSNTSDLIEPFAEVDPTGRFGRYHDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLRNFSEDPVLLNRLHSEVELLRTLKNKYIIVCYSVWKDEERNNLNFITEVCTSGNLRAYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGLAAIVGKSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSIAKIYKKVTTGIKPQALNKVTNAELKAFIEKCIAQPRARPSATDLLKDPFFTELNNDQLGPNPDPTG 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1328 835 ProSiteProfiles Protein kinase domain profile. 561 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1328 835 MobiDBLite consensus disorder prediction 9 37 - -
Lele04g1328 835 CDD STKc_WNK 559 819 - -
Lele04g1328 835 MobiDBLite consensus disorder prediction 1 38 - -
Lele04g1328 835 Pfam Nuclear protein Es2 43 446 IPR019148 -
Lele04g1328 835 MobiDBLite consensus disorder prediction 106 121 - -
Lele04g1328 835 PANTHER ES-2 PROTEIN - RELATED 4 500 IPR019148 -
Lele04g1328 835 Gene3D Transferase(Phosphotransferase) domain 1 644 825 - -
Lele04g1328 835 MobiDBLite consensus disorder prediction 138 156 - -
Lele04g1328 835 MobiDBLite consensus disorder prediction 412 439 - -
Lele04g1328 835 Gene3D Phosphorylase Kinase; domain 1 548 642 - -
Lele04g1328 835 Pfam Protein kinase domain 565 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1328 835 MobiDBLite consensus disorder prediction 99 156 - -
Lele04g1328 835 SUPERFAMILY Protein kinase-like (PK-like) 555 819 IPR011009 -
Lele04g1328 835 FunFam Probable serine/threonine-protein kinase WNK1 546 642 - -
Lele04g1328 835 FunFam probable serine/threonine-protein kinase WNK9 644 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1328 Lele-ChrLele04 18902032 18909500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1328 549 819 MAP Kinase Kinase Kinase AT5G55560 78.967 4.33e-163 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele04g1328 Es2 2.8e-98 No_clan