Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1306 ATGGCTGAATTATGGAACTATTTTGTGATGATCCCTGGGATAGGTGTTTTCAAACGATTGTACCCAAAAAAGAGACAAATTCAAACGTCAATGGTGAATCCAATTTCCACAATAGAAGTGCTGGATATGACGAGCTCACCCACAGGACTGCGGATGCTGAAACCCCCACTTCCAGCGGCTCCTGTATCGTGCTTCAATTCTAGGCAAGTATTGTTAAACTTTCCAAAAACTCGATTTCTCAAAGTCACTTGTGATTACTCGTGCTTAGAAGTTAGAGATGTCAGCTATCAGCCTCCGGGGACGCAATTGAGCCTTTTGAGGTCAATTAATTTTTCACTTCGTGAGAAAAGTTTTGGCCTAATTTTTGGACAGAGTGGAAGTGGAAAAACAACTCTCCTGCAGCTTCTTGCTGGAATAACCAAACCAACCTCTGGTTCCATTTACACCCAAAAATATGATAATGATGGCAAGCCAAGCCAATCTCCCCAGCCATTGGTACCAAAAAGGGTTGGTATTGTCTTCCAGTTTCCTGAGAGGTACTTTGTGGCCGATAATGTGCTTGACGAAGTCACTTTTGGGTGGCCAAGACAAAAGGGTGACTATCAATTGAAGGAGCATCTTGCTTTAAGACTTCAGAGGGCAATTAACTGGGTTGGATTAAGTGGGATCTCCTTGGATAAAGATCCTCACTCCCTTAGTGGTGGTTACAAACGTCGCCTAGCCTTGGCCATACAATTGGTTCATATCCCTGACCTGTTGATATTAGATGAGCCTCTTGCTGGTCTTGATTGGAAAGCACGTGCAGACGTTGTGAAGCTTTTGAAGCATCTAAAAAAAGAATTGACCGTGCTAGTTGTGAGCCATGATTTAAGAGAGTTCGCAAGTCTAGCTGATAGTTCTTGGAGGATGGAAATAGGTGGCAATCTTAGGCAGGATGACATACTAGCAGGATTTACAGTACCTGGTGGTGTATATAGCTCCCAAGATCCAAACCCACATAATAGAGGAACAGCAATTTTGGCTCATAAACCAATGTTCAAGCTATTTGCTCTTTTCAACATGGTTGCTCTGTACAGTTCCACATTTGGATCTTTCTTTCTCTTATGGGCACAAATTGGCAAATTCTCTCCATCAAGTTCCTTCAGTTCTGCAATTTTCATGGTGGGTTTAGCTTTATTGTCAATGACTCTCTCATTCATGGCTGCTTTAAGTTTAGTTGTGTCGACCCATGTCTCATGGATTTCATCTCTGACAATATTCATTGGAATCAGTTCGTTCTGTGGAATATTAATATGGTCAAATGCGAGTAGGAGTATTTTGCTTGTACGCATTGTATCAAGGTATCATGATGAGTATTTTAAAATTTTCTTGTGTGTTATAGGTGCTCTTTCAGCTGTTACCTTGCTAGCCATCGTAGTTACAGGGCCTATTATGTTGCTGTTGTATCTTCTTGATGTGGTACACTAG 1467 0.4165 MAELWNYFVMIPGIGVFKRLYPKKRQIQTSMVNPISTIEVLDMTSSPTGLRMLKPPLPAAPVSCFNSRQVLLNFPKTRFLKVTCDYSCLEVRDVSYQPPGTQLSLLRSINFSLREKSFGLIFGQSGSGKTTLLQLLAGITKPTSGSIYTQKYDNDGKPSQSPQPLVPKRVGIVFQFPERYFVADNVLDEVTFGWPRQKGDYQLKEHLALRLQRAINWVGLSGISLDKDPHSLSGGYKRRLALAIQLVHIPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLREFASLADSSWRMEIGGNLRQDDILAGFTVPGGVYSSQDPNPHNRGTAILAHKPMFKLFALFNMVALYSSTFGSFFLLWAQIGKFSPSSSFSSAIFMVGLALLSMTLSFMAALSLVVSTHVSWISSLTIFIGISSFCGILIWSNASRSILLVRIVSRYHDEYFKIFLCVIGALSAVTLLAIVVTGPIMLLLYLLDVVH 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1306 488 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 89 330 IPR003439 GO:0005524
Lele04g1306 488 Pfam Domain of unknown function 316 405 IPR026961 -
Lele04g1306 488 FunFam ABC transporter I family member 11 chloroplastic 78 314 - -
Lele04g1306 488 Pfam ABC transporter 106 259 IPR003439 GO:0005524
Lele04g1306 488 Gene3D - 80 317 IPR027417 -
Lele04g1306 488 SMART AAA_5 115 307 IPR003593 -
Lele04g1306 488 CDD ABC_cobalt_CbiO_domain1 90 306 IPR015856 GO:0005524|GO:0016020|GO:0055085
Lele04g1306 488 PANTHER HEAVY METAL TRANSPORTER 88 313 - -
Lele04g1306 488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 306 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1306 Lele-ChrLele04 18637854 18643054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1306 89 290 Calmodulin-binding Proteins AT2G36910 24.402 3.21e-08 54.7