Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1295 ATGGAAGCAAGCAAAGAAGAGGAGGCTCATAAAGCAATAGAAATTGCTGAGCAGCGATTTGCTCAGAGAGACTTTGCTGGTGCAAAAAATTATGCATTGAAGGCCAAAATCCTATGTCCAGGACTGGAGGGCATAGCTCAAATGGTGGCGACATTTGAAGTTTACATTGCTTCTGAGATTAAAAATAATGCTGAAAGAGATTATTATTCGATTCTTGGATTAAAACCTTCAGCAGATGAAGAGAGCATCAAGAAACAGTACAGGAAGATGGCTGTGTTGCTTCACCCGGATAAGAACAAATGTGTAGGAGCTGATGGAGCTTTTAAGCTTGTATCCGAAGCGTGGACATGGTTGTCAGATAATGCTAAGCGTAGTTCTTATGATCTCAAGAGAAATACCCAACTATCCGCTGGGATTAATCAGACAAATTTGTCTTCAGTCCATGCCACCGGAGCTACAGGTTATACTTACAATAAATGCTCCAATTTTTCGACCTCCCATGGTAGGCTTGACACTTTCTGGACAATTTGCACTTCTTGTAATGTTCAGTACGAGTATCTACGCAAATACGTGAATAAGAAACTTTCATGCAAAAACTGCCGTGGCACTTTCATTGCTGTGGAAACCGGGGCAGCCCCAGCAACTGGTTCCTTCCCATACGGTCCTTGGTCTTATACGCTGGGTAATAGTTATGGAAGCCATTCATTTGATGGAGTTACGTATGTCCCAACTGGAGCTCCCTATTTTAATGGAAATGGAGTTACTGGATACCATTCTGGACATGGATATGAGTATGTTCCAAATGTTTCATTTCAATGGAGCTCAACAGGACATGTTAGTCAAAACGGATCTACTACATTATCTGCTGGTTCAGTATATCAGGCCAATGGAAATGCAAAGAGAGGAAGACCAAAAATTAGACCAGGAGTTGATAGGAGTCATCGTGTGGGAGAGACTGTTCTCAATATGAATCCAGATGTATCACACTCTTGTTATGATCCGCAGGAAATTAAGCCCAGTAAACCTGATAAGAGAAGGAAAGTTGTTGTGGAAGCCGGCTCCAGAAATAACTACGAAGAAAATGACTTGAAAGTTGCTCCAGAGTCAAGATTGGCCAATAAAAATGAAAGCATTGGGCAAGGCCCAAAGCTTTCCAGTACAAGTGAAGTTCAGTCTAAACAGTCTTCCATGGAATTGGTGTTTGACACTAGAAAAGCATTGATTGAGAAGGCCAGAAGAGAAATTAGAAAGAAACTGGAAGAGATGAAGTTGAAATCTGAAACGGCTGCTGCGGTTAAGGGGAATGAGAAAGCAAAATCTGAAGTCATTGAAGACAAACGAGATATAAATGGGCGACCGAGTCTAAATTTTTCTGGTCATCAACTAGAGCATAGGAAAACCAGTCCAGTCTCAATCACTGTCCCAGATTCTGATTTTCATGACTTTGATAAAGATAGGTCGGAGGAATGCTTCAAGCCAAAGCAAATATGGGCCTTGTATGATGAGGAGGATGGCATGCCTCGATTGTATTGTATCATCCGTGAGGTTATTTCTACCGATCCATTTAAGATTCATATTAGTTACTTAAGCTCCAAAACTGATAGTGAGTTTGGCTCAGTGAATTGGCTAGATTCAGGTTTTACCAAATCTTGCGGAAATTTTAGGGTGTGGAGCTCTGATATTGTTGAGCATGTTAACATTTTTTCTCATGTTCTTAACCGTGAGAAGGCTGGTCGAGGTGGTTGTGTTCGGATATATCCTAGAGTAGGAGCTATTTGGGCTGTTTATCGAAATTGGTCACCGGAATGGAACAGAGGCACGCCAGATGAAGTGAGGCATCAGTATGAAATGGTGGAGGTTCTTGATGAATATTCGGAGGAGTTCGGGGTTGGTGTGACTCCCCTTGTGAAGGTAGATGGATTCAAAACAGTATATCAGAGGGATCCGGACAAAAGTGCCATTAGATGGATACCGAGACGAGAAATGTTGCGCTTCTCGCACCAAGTGCCGTCATGGTTAGTCAAGGAAAAAGGAAGCAATTTGCCAGAAAGGTGTTGGGACCTGGATCCAGCCGCCACCCCAGATGGACTTCTTCACGCTGCAACTACTGAAGGAAACGGTTTGTAG 2127 0.4255 MEASKEEEAHKAIEIAEQRFAQRDFAGAKNYALKAKILCPGLEGIAQMVATFEVYIASEIKNNAERDYYSILGLKPSADEESIKKQYRKMAVLLHPDKNKCVGADGAFKLVSEAWTWLSDNAKRSSYDLKRNTQLSAGINQTNLSSVHATGATGYTYNKCSNFSTSHGRLDTFWTICTSCNVQYEYLRKYVNKKLSCKNCRGTFIAVETGAAPATGSFPYGPWSYTLGNSYGSHSFDGVTYVPTGAPYFNGNGVTGYHSGHGYEYVPNVSFQWSSTGHVSQNGSTTLSAGSVYQANGNAKRGRPKIRPGVDRSHRVGETVLNMNPDVSHSCYDPQEIKPSKPDKRRKVVVEAGSRNNYEENDLKVAPESRLANKNESIGQGPKLSSTSEVQSKQSSMELVFDTRKALIEKARREIRKKLEEMKLKSETAAAVKGNEKAKSEVIEDKRDINGRPSLNFSGHQLEHRKTSPVSITVPDSDFHDFDKDRSEECFKPKQIWALYDEEDGMPRLYCIIREVISTDPFKIHISYLSSKTDSEFGSVNWLDSGFTKSCGNFRVWSSDIVEHVNIFSHVLNREKAGRGGCVRIYPRVGAIWAVYRNWSPEWNRGTPDEVRHQYEMVEVLDEYSEEFGVGVTPLVKVDGFKTVYQRDPDKSAIRWIPRREMLRFSHQVPSWLVKEKGSNLPERCWDLDPAATPDGLLHAATTEGNGL 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1295 708 Coils Coil 405 428 - -
Lele04g1295 708 MobiDBLite consensus disorder prediction 373 391 - -
Lele04g1295 708 MobiDBLite consensus disorder prediction 324 391 - -
Lele04g1295 708 Pfam DnaJ domain 67 128 IPR001623 -
Lele04g1295 708 CDD DnaJ 67 120 IPR001623 -
Lele04g1295 708 Gene3D DnaJ domain 55 152 IPR036869 -
Lele04g1295 708 MobiDBLite consensus disorder prediction 449 469 - -
Lele04g1295 708 SMART dnaj_3 66 123 IPR001623 -
Lele04g1295 708 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lele04g1295 708 SUPERFAMILY Chaperone J-domain 64 138 IPR036869 -
Lele04g1295 708 MobiDBLite consensus disorder prediction 454 469 - -
Lele04g1295 708 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lele04g1295 708 PRINTS DnaJ domain signature 123 142 IPR001623 -
Lele04g1295 708 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lele04g1295 708 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lele04g1295 708 MobiDBLite consensus disorder prediction 336 369 - -
Lele04g1295 708 Pfam Domain of unknown function (DUF3444) 470 676 IPR024593 -
Lele04g1295 708 PANTHER BNAC03G44070D PROTEIN 1 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1295 Lele-ChrLele04 18501277 18503403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1295 8 308 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.056 9.09e-33 128