Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1269 ATGGAGACCGGTCAAGTGATATCAACTTTCTCAACTGGGAAAATCGCTTATGTGGTCAAGCTTAATCCTGATGAAGATAAGCAGAATGTTTTGTTGGCTGGTATGAGTGATAAAAAGATTGTTCAGTGGGATATGAATACTGGGCAGATAACACAAGAGTATGATCAGCATTCTGGGGCTGTGAATACCATCACATTTGTTGATAACAACAGGAGATTTGTTACTTCCAGTGACGACAAGTTTCTCCGAGTATGGGAATTTGGTATTCTTGTGGTTATTAAGTACATCAGCGAACCACACATGCACTCTATGCCATCCATTTCCCTTCATCCTAACTCCAATTGGCTTGCTGCACAAAGCTTGGATAATCAGATACTTATCTATAGCGCTAGGGAGAAGTTCCAACTTAACAAGAAAACGAGGTTTGCTGGACACATTGTTGCTGGATATGCGTGTCTGGTGAATTTTTCCCAGATGGGCGCTTTGTCATATCTGGAGATAGGGTAA 507 0.4142 METGQVISTFSTGKIAYVVKLNPDEDKQNVLLAGMSDKKIVQWDMNTGQITQEYDQHSGAVNTITFVDNNRRFVTSSDDKFLRVWEFGILVVIKYISEPHMHSMPSISLHPNSNWLAAQSLDNQILIYSAREKFQLNKKTRFAGHIVAGYACLVNFSQMGALSYLEIG 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1269 168 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 54 86 - -
Lele04g1269 168 ProSiteProfiles Trp-Asp (WD) repeats profile. 54 86 IPR001680 GO:0005515
Lele04g1269 168 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 2 133 IPR011047 -
Lele04g1269 168 Gene3D - 1 165 IPR015943 GO:0005515
Lele04g1269 168 SMART WD40_4 3 44 IPR001680 GO:0005515
Lele04g1269 168 SMART WD40_4 47 86 IPR001680 GO:0005515
Lele04g1269 168 SMART WD40_4 90 129 IPR001680 GO:0005515
Lele04g1269 168 PANTHER PRE-MRNA-PROCESSING FACTOR 17 2 160 IPR032847 GO:0000398|GO:0071013
Lele04g1269 168 Pfam WD domain, G-beta repeat 48 85 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1269 Lele-ChrLele04 18101802 18102308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1269 28 128 U-box Gene Family AT2G33340 26.214 5.58e-07 46.6