LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele04g1259	ATGTCTATCGAACTTGAAGTGCTTAGTGCCCTTGATGTTGCGGAGACACAAGGGTACCACATCACAGCCGCCATAATTGCCGGCATGGGCTTCTTCACTGATGCCTATGATCTCTTCTGTATACCAAACGTCACCAAGTTGCTCGGCCGTATATACTACACCCAGGACGGTGTGGCGAAGCCCGGGACCCTCCCTCCCGGCGTGAATTCCGCCATCATCGGCGTTGCCTTGTGTGGCACCTTAATAGGTCAACTTTTCTTTGGCTGGCTTGGAGACAAAATAGGAAGAAAAAAGGTCTATGGTGTAACCCTAATTCTCATGGTTGTCTCCTCCCTGGCCTCCGGTCTCTATATCGGTAAATCTGCAAAGGGCGTCATCGCCACTCTCTGCTTCTTCCGCTTCTGGCTCGGATTCGGCATCGGCGGCGACTACCCTCTCTCCGCCACCATCATGTCTGAATATTCCAACCAAAAATCTCGTGGAGCTTTCCTCGCGGCAGTTTTCGCCATGCAAGGCTTAGGGATTCTGTTCGGAGGCATCGTTTCCCTAATTGTCGCGACGGCGTTCAATCACGCCTATGAAGCTCCTCCATATAAGGTCAACGCTGCAGCTTCTCTTGTTCCTCAAGCTGACTACGTATGGCGAATCATTGTAATGTTTGGTGCAGTACCAGCAGCTATCACATTCTATTGGCGTATGAAAATGCCAGAGACGGCTCGTTATACGGCGCTCATCTCTAAGAATGCGAAGCAAGCCGCGGAAGACATGGCTAAAGTAATGAGAGTTGATATCAAAAATGAACCAGAAAAAGTAGAGAAGATGACTCAGAGGAAGAACAGATACGGGTTGTTCAGTTGGGAGTTTGCTCGAAGGCATGGGCTTCACTTGCTTGGAACCACCGCCACTTGGTTTCTATTAGACATTGCATATTACAGTTCTAATCTTTCTCAGAATGATATTTACACTAAACTTGGGTGGCTTCCTCAAGCCGAAGACATGAACGCAATTTATGAGGTTTACAGGGTTGCGAGAGCACAAACGCTTATAACATTATTTGCCGCGGGAAAAGCAGGAGCCACCATCGGCGCCATCGGGTTTTTGTTTGCCTCACAGAGCATGGATCCGAAAATGACAGATGCAGGGTATCCACCTGGCATTGGGATGAAGAATTCTCTTCTTATGCTTGGTGTGACTAATTTTGTTGGCATGCCATTTACGTTCCTCTTGCCGGAATCAAAAGGGAAATCGTTGGAGGAGTTAAGCGGGGAGAACAAAGACGAAGACGACAAAGGAGGGGATATAGAGCTCAGTGCCTCTTCCAATAAAGGGATTTAG	1335	0.4839	MSIELEVLSALDVAETQGYHITAAIIAGMGFFTDAYDLFCIPNVTKLLGRIYYTQDGVAKPGTLPPGVNSAIIGVALCGTLIGQLFFGWLGDKIGRKKVYGVTLILMVVSSLASGLYIGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYSNQKSRGAFLAAVFAMQGLGILFGGIVSLIVATAFNHAYEAPPYKVNAAASLVPQADYVWRIIVMFGAVPAAITFYWRMKMPETARYTALISKNAKQAAEDMAKVMRVDIKNEPEKVEKMTQRKNRYGLFSWEFARRHGLHLLGTTATWFLLDIAYYSSNLSQNDIYTKLGWLPQAEDMNAIYEVYRVARAQTLITLFAAGKAGATIGAIGFLFASQSMDPKMTDAGYPPGIGMKNSLLMLGVTNFVGMPFTFLLPESKGKSLEELSGENKDEDDKGGDIELSASSNKGI	444

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele04g1259	444	MobiDBLite	consensus disorder prediction	417	435	-	-
	Lele04g1259	444	CDD	MFS_PhT	25	413	-	-
	Lele04g1259	444	Gene3D	MFS general substrate transporter like domains	353	436	IPR036259	-
	Lele04g1259	444	Gene3D	MFS general substrate transporter like domains	19	267	IPR036259	-
	Lele04g1259	444	Gene3D	MFS general substrate transporter like domains	271	352	IPR036259	-
	Lele04g1259	444	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	19	333	-	-
	Lele04g1259	444	Pfam	Sugar (and other) transporter	25	276	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Lele04g1259	444	MobiDBLite	consensus disorder prediction	417	444	-	-
	Lele04g1259	444	SUPERFAMILY	MFS general substrate transporter	12	421	IPR036259	-
	Lele04g1259	444	FunFam	Probable inorganic phosphate transporter 1-5	19	255	-	-
	Lele04g1259	444	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	23	444	IPR020846	GO:0022857

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele04g1259	Lele-ChrLele04	17958814	17961059	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele04g1259	353	441	Inorganic Solute Cotransporters	AT2G32830	60.440	1.53e-27	113