Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1227 ATGGAAATCTCTAGCACCTATAATGGCGGTGGCATGATGTGGTTTTTTAAGGATAGAGGATTTGATGATAAAAGCATACAAGGAATGTTCAGGAAGTGCAAGCGCCTTGAGGTTGTGCATGAAGAAAGGGCATCTGAGAATTGGACCTATTTGACAAGCATTGGCATTCAAGAGAGGAAACTCCCATCAATTGTTTCAAAATGTCCGAAGATACTTACTCTTGGCCTTAATGAGAAGATAGTTCCCATGGTTGAATGCCTGAAGACACTGGGAACAAAACCCAATGAAGTTGCGTCTGCCATATCCAAGTTCCCTCATTTACTCTCACATAGTGTGGAAGAGAAGCTTTGTCCTCTTTTGGCCTTCTTTCAGGCATTGGGCATCCCTGAAAAGCGACTTGGAAAAATAATACTGCACAATCCAAGGCTTATTAGCTACAGCATCGAAACAAAGCTCACAGAAATTGTGGACTTCCTTGCTAGCCTTGGTCTTAATAAAGAAGGAATGATTGGAAAAATCTTAGTGAGGAACCCATATATCATGGGGTATAGCGTTGATAAAAGACTCCGCCCTACTACTCAGTTTCTGAAGTCAATAGGTCTGACTGATCTCGAACTTCAATTGGTAGCTGTGAACTTCCCAGAAGTCTTGAGTAGAGATGTGAACAGGGTTTTGGAGCCCAATTATGCATACTTGAAGAGATGTGGATTTCAAGATAGACAGATTGTTGCTTTGGTGGTTGGATTTCCTCCAATCCTGTTCAAGAGCATCCAAAATTCTTTAGAACCCAAGATAAGGTTTCTTGTAGATGTGATGGGGAGACAAATCCATGAAGTTGTTGATTATCCTGGCTTCTTTGGTCATGGTCTGAAGAGAGAAATTGAGTTGCGGCACAAAATTTTAACGAAGAGGAACTTAGATTGTAGCTTGAGTGAAATGCTTGACTGTAATAAGAAGAAGTTCTTCTTAAAATTTGGTTTATTAGAAGGTCATGTGTTGAGTAATAAGGTTATCCCTTTTCTGAGATCCATGGCCCGTTGGAGTGGAATTTTGAGGGTTCCATTATATCCCAACCCCAGGACTTGCTATAGAGTTGGTGCATCTATCTGTCTTTCTCCTGAATCCAAAACATTGAGTGTACCATCTGCAAATGCTGTCTTTTTCTGTGGTGATCGAGTTGAAGGGACTGGAAATCCAGTGATTGAGAGACTATCAGATGTACAGAAAATATCTGAAATTCTGGTGTCAAAATTTGGTCATTCCATTAATGCTTGGGTTATTGAGGCTTCTGCTTTTGATGGGCCTTTTGCGGTCTACAATGAGTTCATACCTTCTGTGAATCAATATGGAGAGCCAAAGTTGTACAGTCCAGTTGGATTTCCAGCATCTACATCAACTGTCTCACTCTTATCAAATTCCCTTGAAGAAGTAAAAAAGGTGGCATTTGGGCAGCAAATAGATTCAGAGTCACTCTCGCGATGCAAAAATTCCTCTAGTTTTGCTCATCCTAGGACAATAATCCTCGGATTCAGCAAAGGTGGGACTGTGCTTAATCAGTTGGTCACAGAGCTTGGCTTTTCAGATGTTGGATCCATTGATTTGGGAAAACCAGTTGACACAAAGTTTTGTGCATTTGATGAGTCTTGTATAGTTCCTAAAACAAAGAAAACCCTTCTGAATAGCATAAGTGAGATTCATTATGTTGATGTTGGTTTGAACTCAACTGGTGCATACTTAACCAACACTGATGCGATTGAGGGAATCTCCAGATGGCTCATGCGAGGGGCTCCCGGAGTTCGCTTTATGCTTCACGGAACTCCCCGGCAATGGTCTGACGAATGGCGAGTTTGGATACGCCGGGAAAAAGACACATTACTCCACCTCCTTCAATCTGAAGCTCCCAAGAGTGGGGGGAAATTACAAGTATATGAGAAGTATTACTTTGCTGATAGGCCTGCAAATTTGCAGATGCACTTTGAAATAATTGAAAGATTGGATGTAAATTGA 2007 0.4126 MEISSTYNGGGMMWFFKDRGFDDKSIQGMFRKCKRLEVVHEERASENWTYLTSIGIQERKLPSIVSKCPKILTLGLNEKIVPMVECLKTLGTKPNEVASAISKFPHLLSHSVEEKLCPLLAFFQALGIPEKRLGKIILHNPRLISYSIETKLTEIVDFLASLGLNKEGMIGKILVRNPYIMGYSVDKRLRPTTQFLKSIGLTDLELQLVAVNFPEVLSRDVNRVLEPNYAYLKRCGFQDRQIVALVVGFPPILFKSIQNSLEPKIRFLVDVMGRQIHEVVDYPGFFGHGLKREIELRHKILTKRNLDCSLSEMLDCNKKKFFLKFGLLEGHVLSNKVIPFLRSMARWSGILRVPLYPNPRTCYRVGASICLSPESKTLSVPSANAVFFCGDRVEGTGNPVIERLSDVQKISEILVSKFGHSINAWVIEASAFDGPFAVYNEFIPSVNQYGEPKLYSPVGFPASTSTVSLLSNSLEEVKKVAFGQQIDSESLSRCKNSSSFAHPRTIILGFSKGGTVLNQLVTELGFSDVGSIDLGKPVDTKFCAFDESCIVPKTKKTLLNSISEIHYVDVGLNSTGAYLTNTDAIEGISRWLMRGAPGVRFMLHGTPRQWSDEWRVWIRREKDTLLHLLQSEAPKSGGKLQVYEKYYFADRPANLQMHFEIIERLDVN 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1227 668 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 97 329 - -
Lele04g1227 668 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Lele04g1227 668 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Lele04g1227 668 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Lele04g1227 668 SMART mt_12 243 275 IPR003690 GO:0003690|GO:0006355
Lele04g1227 668 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Lele04g1227 668 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Lele04g1227 668 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Lele04g1227 668 Pfam C2orf69 488 630 IPR018881 -
Lele04g1227 668 Gene3D Transcription termination factor 3, mitochondrial 91 329 IPR038538 -
Lele04g1227 668 PANTHER UPF0565 PROTEIN C2ORF69 346 666 IPR018881 -
Lele04g1227 668 Pfam mTERF 15 321 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1227 Lele-ChrLele04 17504320 17511073 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele04g1227 mTERF 4.1e-60 No_clan