Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1211 ATGGAAACAAATGTGCCACCAGGCTTCAAGTTTAACCCACCAGACCAAGAACTTACATGGCATTACTTGTACAACAAGGTTAATAGCAAACCCCTCCCTTGTAATGCAGTTATTGATTGCGACATTTATGGATATGACAGTTCTTGGATGAAGATGTTTGAGGATTGGGAAGAGGAATCTCTTTACTTCCTCACTAGATTAAGAAACTGGAGCACCCAAAAAAGTGGTTCTTCTTCAAGGGTCATGAGAGCCACAAAGTTTGGTAGCTGGAAGTGTCAATCTGACATGAAAATTTATGCTGGGAAGAATCATATTTGGTCTAAGAGGACCTTCTTCTTCATAGAGAAGGAAAGGAAGGATGAAGAGCCAAAGAAAAAAAGATACAAGAAGGCAACCGGTTGGACAATGTTCGAGTACAGACTTGATGTTTCTCAAATTGAATGTCAACGGGATGCTCCATTTCCTGAAGAGCTAAAGCAAGAAGACAACAAACTTGAGGGTTCTGAGATGCTTCTTGATTATAATCTTGAGGCTTTCTTAGAGGGCTTTTCTGTTGAACCTTATGATACTGGGAGACCTTCCTGTGCTCTACTTGATGTTGGCCTTGCTAGGATCACAACTGGTAATCTTTTGATTAAGAGTGGATTTGATTTGAGTCAAGCTAAATACTAA 672 0.4003 METNVPPGFKFNPPDQELTWHYLYNKVNSKPLPCNAVIDCDIYGYDSSWMKMFEDWEEESLYFLTRLRNWSTQKSGSSSRVMRATKFGSWKCQSDMKIYAGKNHIWSKRTFFFIEKERKDEEPKKKRYKKATGWTMFEYRLDVSQIECQRDAPFPEELKQEDNKLEGSEMLLDYNLEAFLEGFSVEPYDTGRPSCALLDVGLARITTGNLLIKSGFDLSQAKY 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1211 223 Gene3D NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Lele04g1211 223 Pfam No apical meristem (NAM) protein 6 141 IPR003441 GO:0003677|GO:0006355
Lele04g1211 223 SUPERFAMILY NAC domain 3 145 IPR036093 GO:0003677|GO:0006355
Lele04g1211 223 ProSiteProfiles NAC domain profile. 5 161 IPR003441 GO:0003677|GO:0006355
Lele04g1211 223 PANTHER NAC TRANSCRIPTION FACTOR 56 5 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1211 Lele-ChrLele04 17033244 17034895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1211 2 145 NAC Transcription Factor Family AT1G69490 31.724 4.52e-15 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele04g1211 NAM 9.5e-17 No_clan