Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1210 ATGGATACAACTCTACCACCTGGCTTCAAGTTTAACCCGACAGATCAAGAACTGATTTGGCATTACTTGTGCAAGAAGGCTTATGGCAAACCCCTCCCTTGTAAAGCAATTATTGATTGTGACATTTATGGAGGTGACAGCTCTTGGGGGAAGATGTTTGAGGATCGGGAAGAGGAATCTCTTTACTTCTTCACCAGATTAAGAAACTGGAGCACCCAAAAGAGTGGTTCTTCTTCAAGGGTCATGAGAGCCACAAAGTTTGGTACTTGGAAGTGTCAATCTGACATGAAACTGTATGCTAGGAAGAAGCATATCGGGTCTACGAGGACCTTCTCCTTCATAGAGAAGAAGGAGGAAGAAGAGCCCATGAAAAAAGGATCCAAGAAGACAAATGGTTGGACAATGCATGAGTACAGACTTGATGGTTGTCTTACGCATCAAAAGGAACAAAGTTCTCTAGATTATAGGTATGTGGTTTCCAGGATCAGCAGGCCAAGACATATGAGGAGAGATGAAGGAGAATCAATTAGCTCTCTGATTGAGTGTGAACAGGATGCTCCATTTCCTGAAGAGCCAAAGCAAAACAACAGAAAATTTGAGTGTGCTGAGATTCTTCCTGATTATAATCTTGACGCAGATATAAATTTTGAATGGTTATCATATTTTCTTGAAGACAAGGATCTAGATGATTTTCCCTTTCTTTCATCAACAAGTTTAGATGTTATTGCAAAAAAAGAATCTGCTAGTGTTGCTGGCGATATTATTCTTGCTGCCGCATTTGCATGTGAGTTGCCATGCTATGGTCTCAAAGTAGTGCTACAAAGTATGCTTCAGGCTTGA 840 0.4083 MDTTLPPGFKFNPTDQELIWHYLCKKAYGKPLPCKAIIDCDIYGGDSSWGKMFEDREEESLYFFTRLRNWSTQKSGSSSRVMRATKFGTWKCQSDMKLYARKKHIGSTRTFSFIEKKEEEEPMKKGSKKTNGWTMHEYRLDGCLTHQKEQSSLDYRYVVSRISRPRHMRRDEGESISSLIECEQDAPFPEEPKQNNRKFECAEILPDYNLDADINFEWLSYFLEDKDLDDFPFLSSTSLDVIAKKESASVAGDIILAAAFACELPCYGLKVVLQSMLQA 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1210 279 ProSiteProfiles NAC domain profile. 5 165 IPR003441 GO:0003677|GO:0006355
Lele04g1210 279 Pfam No apical meristem (NAM) protein 6 140 IPR003441 GO:0003677|GO:0006355
Lele04g1210 279 PANTHER NAC TRANSCRIPTION FACTOR 56 5 183 - -
Lele04g1210 279 Gene3D NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Lele04g1210 279 SUPERFAMILY NAC domain 3 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1210 Lele-ChrLele04 16753828 16755371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1210 2 248 NAC Transcription Factor Family AT1G77450 28.409 1.78e-18 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele04g1210 NAM 4.5e-22 No_clan