Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1203 ATGAGGACACAGTGGTTTTCTGAAAACTTTGAAGAGGTTGAGTTAACAAGTGCATTGGCTAGATTAGGAAACTGGAGCACCCAACAAAGTGGTTCTTCTTCAAGGGTCACGAGAGCCACAAAGTTTGGTACTTGGAAGTGTCAATCTGACTGGAAAATTTATGCTGGGAAGAAGCATATTGGGTCTAAGAGGACCTTCTCCTTCGTAGAGAAGAAGAAGAAGGACAGAGAGCCAAAGAAAAAAGGATCCAAGAAGACAGCTGGTTGGACAATGCACGAGTACAGACTTGATGGTTGTCTTATGCATCAAAAGGAACAAAGTTCTTCAGATTATGGCCATGTGGTCTATAGGATCACCAGGCCAAGACACATGAAGAGAGATGAATGA 387 0.4289 MRTQWFSENFEEVELTSALARLGNWSTQQSGSSSRVTRATKFGTWKCQSDWKIYAGKKHIGSKRTFSFVEKKKKDREPKKKGSKKTAGWTMHEYRLDGCLMHQKEQSSSDYGHVVYRITRPRHMKRDE 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1203 128 Pfam No apical meristem (NAM) protein 29 96 IPR003441 GO:0003677|GO:0006355
Lele04g1203 128 ProSiteProfiles NAC domain profile. 1 121 IPR003441 GO:0003677|GO:0006355
Lele04g1203 128 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 29 121 - -
Lele04g1203 128 Gene3D NAC domain 23 125 IPR036093 GO:0003677|GO:0006355
Lele04g1203 128 SUPERFAMILY NAC domain 29 119 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1203 Lele-ChrLele04 15972584 15972970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1203 35 100 NAC Transcription Factor Family AT5G07680 44.776 3.34e-07 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele04g1203 NAM 3.8e-07 No_clan