Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1166 ATGTTTGAATTTTGGTTCTTCCTCTTCAAGAAGTACGACGACTGTGAGCAATGGGCCGCTCTCGCGCCGCTTCGCGCCGCTTCGCGCCAAGCTGACGATGACCCCAGCCAAAGATCCAAGAGGAAAAAGGCAGCTTTGAATGCAGAGAATTCAGAAATTTTAAGTATAGGCCATGGAATAAATGAGGGGAAAGTATCTCTTTACCACTGTAATTATTGCAACAAAGATATTTCCGGGAAGATCCGCGTTAAGTGTGCTGTTTGTCAAGATTTTGATCTCTGCATAGAGTGCTTCTCTGTTGGAGCTGAGGTGACACCTCACAAAAGCAATCATCCATATCGGGTTATGGATAATCTATCTTTTCCTATGCTATGTCCAGACTGGAATGCAGATGAAGAGATGCTGCTTCTAGAGGGCATTGGAATGTATGGATTTGGCAATTGGGCTGAAGTGGCAGGATGTGTTGGAACAAAATGCAAGTCTGAATGTATTGACCACTATAATGCTTTTTTCATGAATTCACCATGCTTTCCTCTCCCTGATTTGTCTCGTGTCATGGGAAAGAGCAAAGAGGAGCTCCTTGCCATGGCCAAAGAGTATGGCGATGTTAAAAAAGAACTTTCTCCAAAGGCAGAGCTTACCCTGAAAGAAGAGCCTCACTTTTCGGCAGGAATGAATTCAGAGGAATCTAAAAGGGAAGAACCCGCTAACCAAACATTGTCTAGCTTAACTTCAGGTGCTGATATGTGCACAGTTCCTGCCAAAGCTTATTCAAGTTCATTTAAGAAGGCTTCCAATGCTAACCAGATTAATAACAGGATTAAAATGGAAGTGGAGTCTCAACCGGATCGAAGCATTAGAGAGAAAAAACCCAAGTTATATGGGGAAGATGGGCCTTCTGTGATGGAATTGAGTGGATACAATTTTAGGAGAGAAGAATTTGAGATTGAATATGACAATGATGCAGAACAAGTATTAGCAGATATGGAATTTAAGGACACTGATACTGAATCTGAACGTTTATTAAAACTACAAGTGCTCCATATATACTCCAAAAGGTTAGATGAACGAAAACGGAGAAAGAATTTTATCCTTGAAAGAAATTTGCTTTATGCTGACCCCTTTGAGAAATCTCTTACACCTGAAGAGCTACATATGTGTCAGCCCTATAGGGTCTTCATGCGATTTCACTCAAAAGAAGAGCACAAGGAGTTTCTCAAAAGTATTATTGAAGAACATCATATTGTCAAGAGAATACAAGATCTCCAGGAAGCTCGAGCTGCTGGCTGTCGATTATCTGCCGATGCATATAGATTTATTGATCTCAAGAGGGCAAAGGATGCTGAACAAAGTGCCTATAAAGAAAGTGCGAAGGATTCATCTGCCACAATACAGGCATTGTCGAAGTCTCTAGATGATTGGGATGTCTCTGGAATTAGGGGCGCCGAGTTACTATCAGAATCTGAGAAAGAGCTATGTGATCAGATTAGAATTCTACCATCACACTATCTCAACATGTTGCAGATCATGACACTAGAAATTTCTAAGGGTAATGTGACCAAGAAATCTGATGCATATATCTTGTTCAATGTAGAACCCAATAAAGTTGATAGAGTTTATGATATGCTTGTGAAAAAGGGGATTGCTCCAACTTAG 1656 0.4088 MFEFWFFLFKKYDDCEQWAALAPLRAASRQADDDPSQRSKRKKAALNAENSEILSIGHGINEGKVSLYHCNYCNKDISGKIRVKCAVCQDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPMLCPDWNADEEMLLLEGIGMYGFGNWAEVAGCVGTKCKSECIDHYNAFFMNSPCFPLPDLSRVMGKSKEELLAMAKEYGDVKKELSPKAELTLKEEPHFSAGMNSEESKREEPANQTLSSLTSGADMCTVPAKAYSSSFKKASNANQINNRIKMEVESQPDRSIREKKPKLYGEDGPSVMELSGYNFRREEFEIEYDNDAEQVLADMEFKDTDTESERLLKLQVLHIYSKRLDERKRRKNFILERNLLYADPFEKSLTPEELHMCQPYRVFMRFHSKEEHKEFLKSIIEEHHIVKRIQDLQEARAAGCRLSADAYRFIDLKRAKDAEQSAYKESAKDSSATIQALSKSLDDWDVSGIRGAELLSESEKELCDQIRILPSHYLNMLQIMTLEISKGNVTKKSDAYILFNVEPNKVDRVYDMLVKKGIAPT 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1166 551 MobiDBLite consensus disorder prediction 278 297 - -
Lele04g1166 551 FunFam Transcriptional adapter 2 466 550 - -
Lele04g1166 551 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 68 546 - -
Lele04g1166 551 MobiDBLite consensus disorder prediction 278 296 - -
Lele04g1166 551 ProSiteProfiles SWIRM domain profile. 465 551 IPR007526 GO:0005515
Lele04g1166 551 CDD ZZ_ADA2 68 116 IPR041983 -
Lele04g1166 551 Pfam Zinc finger, ZZ type 68 108 IPR000433 GO:0008270
Lele04g1166 551 FunFam Transcriptional adapter 2 121 173 - -
Lele04g1166 551 SMART zz_5 64 109 IPR000433 GO:0008270
Lele04g1166 551 ProSiteProfiles SANT domain profile. 123 175 IPR017884 -
Lele04g1166 551 MobiDBLite consensus disorder prediction 216 244 - -
Lele04g1166 551 SUPERFAMILY Homeodomain-like 121 174 IPR009057 -
Lele04g1166 551 ProSiteProfiles Myb-like domain profile. 128 171 IPR001005 -
Lele04g1166 551 ProSiteProfiles Zinc finger ZZ-type profile. 65 121 IPR000433 GO:0008270
Lele04g1166 551 Gene3D - 122 173 - -
Lele04g1166 551 MobiDBLite consensus disorder prediction 216 235 - -
Lele04g1166 551 Gene3D - 62 116 IPR043145 -
Lele04g1166 551 ProSitePatterns Zinc finger ZZ-type signature. 70 97 IPR000433 GO:0008270
Lele04g1166 551 Gene3D - 465 549 IPR036388 -
Lele04g1166 551 PIRSF Txn_adaptor_ADA2 448 550 IPR016827 GO:0003713|GO:0006357|GO:0035065
Lele04g1166 551 PIRSF Txn_adaptor_ADA2 57 470 IPR016827 GO:0003713|GO:0006357|GO:0035065
Lele04g1166 551 SUPERFAMILY Homeodomain-like 468 548 IPR009057 -
Lele04g1166 551 SUPERFAMILY RING/U-box 68 131 - -
Lele04g1166 551 SMART sant 124 173 IPR001005 -
Lele04g1166 551 FunFam Transcriptional adapter 61 116 - -
Lele04g1166 551 Pfam Myb-like DNA-binding domain 127 168 IPR001005 -
Lele04g1166 551 CDD SANT 128 168 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1166 Lele-ChrLele04 9821807 9860907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1166 25 549 EF-hand Containing Proteins AT3G07740 52.743 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele04g1166 Myb_DNA-binding 3.9e-09 CL0123