Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1165 ATGTCTTCCTCATCACCATCTTCATCTTCTTCTTCTTCACCACCTTCATCTTCCCCAGATGACCCCACCAACAACAATGGCTCTGATCCTGGCCCTAGTACCAGTCGACGAAGAAGACGACAACGTCCTATGAACGAGGTTTTGCCTGAGCCTTTTCTTGAAGCTTTAGCCATTCAAATCGCCATTGAAGCTTCTCACACTCATGGACGTCTCGCCACTGCTCCTTCCATTGCCAATCTCTTTCAGGTTTGTTCTACATGGAGAGCCATTTCGCGCTCGGATCACCTGTGGCAGCGGCTCACTAGACGCATCTGGCATCGAGCTCTTAGAATACGCGACACATGGCATGAAGAGTTCATCCTCTGGCATGAAACGGCTCGCAATTTTGTGACAGGTAGATACGTCTACACCTCCCTACACTATAACCCAACCCCATTTGACTTAGACCCACCCCATCTTTGCTGTTGTCTCACGCTCTCCGACAACCACCTTGCTTGTGGCTTCACCGACGGCACAATTCGCCTCTTTGACCTCCAAACACGCGCCCACGTCATCACCTTCCGGTCCCACCATGATGACGTGTTAGGGCCTTTCTCGCGATCCGTGTCGGGAATTATCATCACAAACTCCTCGCTGGTCTTTGCCACATTGGACGGGAACATCTACATGGCAGACATCAACGGGCCGCCCGATACCCACATAGCCCGACCCGGTGACATTCTGAACAACGGCGTCTTGGTGGAGTTCGCCGGCAGTGGGCGGTGGTGGGTGGGCCTCTTTGCTGGCGTCCCACGTCGAGCATTCCGTGTGTGGGACGCACGAAACGAGCAACCCGATTACTTTGGCGGATCCTTGACCGACCCGGATTCCGTCCAGGGCTGGCACATGCTGACTGATATAACCGAACCGGTGGGTCGCTTACGTGTTACCACCCGCGAGCTGGCCGTGGCATGCACGCGCTCGAGGCTCGTGGTTTTCGACTTGAGGAACCCAGGGGTTGTATTACGTGAGCTCGTGCCCAGAGTAGGCTTCATTGTGACTTCGCTCGATGTGAGCCACGAGGGGTTCGTTATCGTGGAGAGGAGGGGCCGTGCTAGAGTGCGCTGGGTGAGCACGTTAGAGCCTCAATGTGAAGAATTTACGGTGGCAGGAGCTTCCCTGAGGGGGTTGATCGGGTGCATGAACTTGGGGTATGTGCTAATATGCGCCGGTGGCTATGTGAGATTGTGGGACGTTGAACTTGGAGAGGCACATCTGCGTTTGACCATAAACGAAAGGGTAGGATTGGGTATGGCAATGATTGCGAATGACAGACACGTGGCGGCAGTATGTAGAGACACGTCAATCCACCTCTGGGATTTTGGTGTACACTAG 1374 0.5422 MSSSSPSSSSSSSPPSSSPDDPTNNNGSDPGPSTSRRRRRQRPMNEVLPEPFLEALAIQIAIEASHTHGRLATAPSIANLFQVCSTWRAISRSDHLWQRLTRRIWHRALRIRDTWHEEFILWHETARNFVTGRYVYTSLHYNPTPFDLDPPHLCCCLTLSDNHLACGFTDGTIRLFDLQTRAHVITFRSHHDDVLGPFSRSVSGIIITNSSLVFATLDGNIYMADINGPPDTHIARPGDILNNGVLVEFAGSGRWWVGLFAGVPRRAFRVWDARNEQPDYFGGSLTDPDSVQGWHMLTDITEPVGRLRVTTRELAVACTRSRLVVFDLRNPGVVLRELVPRVGFIVTSLDVSHEGFVIVERRGRARVRWVSTLEPQCEEFTVAGASLRGLIGCMNLGYVLICAGGYVRLWDVELGEAHLRLTINERVGLGMAMIANDRHVAAVCRDTSIHLWDFGVH 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1165 457 MobiDBLite consensus disorder prediction 1 46 - -
Lele04g1165 457 Gene3D - 40 130 - -
Lele04g1165 457 Gene3D - 146 456 IPR015943 GO:0005515
Lele04g1165 457 PANTHER WD40 REPEAT PROTEIN 12, 37 8 413 - -
Lele04g1165 457 SUPERFAMILY F-box domain 74 124 IPR036047 GO:0005515
Lele04g1165 457 MobiDBLite consensus disorder prediction 1 32 - -
Lele04g1165 457 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 150 454 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1165 Lele-ChrLele04 9787666 9795696 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Lele04g1165 None None None