Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1150 ATGGAAGATAAGAAGGATGCTATGATTAATTCCCTTTGGCAGAACAATGTGGTTGATATCGAGACAACTCTGTCATGTGTCTGCCAAGCTGTTCTTAAATATCCTAGCGGGTCTAAAGACGTTTTGAAGGAACGGGCTAAACCCTTGCAGAAGTTAGGAGCTGTCTTCCAAGGCGCTAAGGCTGCTTATAGTAGAGAAAACAGTCTACGCCATGAAAGTGCCGAAACTGGAGAGTTTGTTGGAGTTATTCAATTCCTGGGCGGTGCCAGGGGAGCCTGCAGTTATCTAGTTGCTGAGACATTTATGGAAGATAACAAAAAATACAAGGAAATGAATATCGCAAAAGATGCGTTCCATTGTCTGATATGTTTGGAAGGTATTGAAGTTGGTACAACAGTAATTCCCATACCTTATCCTCATTTGCTATATGAAGGTTGCCTTATCAACTGGTTGCAGAGAAGGAATACCTGCCCCCAATGCCGCTATCGAATCCTTCAGTTTTCAATTCTCCACTTAAAAATTCTACCAGTAAATGATTTCTACAAGCAGTATTATAAAACTCTGCATAGCATAGAGCATACAATAGTCATGAAGGTGATTTTTGAGAAAAGAAATTTCCACGAGGATGCGGAGAATGCAGTACTTGAATATGGCATATGGTTGAGTGTGCAACCAAAGAGAGGTGATGAGATTGAGTTTGTCTGTTGTTCTGAGGGTTGGGAAGAAACGGAAGGAGTAGGGAGTAAAAGGGATAACCAAGGAAAAGAACAAAGACAGATAGAAGGAAGTAAGCTTCAGAGGTTAAGGAGAAAATGTGGCATGGAGGAAGAATTTTGTGTGGGACAGATAGGGAGTAGTGGTGAATTGGCTTTATGGTGCAAAAAAGATGTGACTATTAATGTGTGGCATGCATCAAAAAATATTATTCATAAAAGTATAAGCCCTGCTGGAAGAAAAGTGCCTAACTATGTTACATATGTATATGGGGCACCAAGGGATAAAGAGAAGATAGAGGAAAGGCTAGATAGAACAGTGTCCAATGTAGAATTCAGGAAGGCCTTCCAAGGAGTAATGGTGCTGCACATTGAACTAGTGGGCTCAGACCATCAGTTGCTTTGTAAAAGATCCAAAAATAAGATTGTGAAGTTGAAAGGGCGTGAGGGGCAATGGTTGGAGAAGGAAGAGAACATCAACAAGGCTTTTACTGAATTCTGCAGTAGGCTATTTGCTTCTGAAGGGTGTGTGGGATTAGAAGCAGTACTGGAGTTTGTGCAGAAGAGTGTAACAAAAGAAGACAATCAAATGCTCATAAGATAG 1317 0.4085 MEDKKDAMINSLWQNNVVDIETTLSCVCQAVLKYPSGSKDVLKERAKPLQKLGAVFQGAKAAYSRENSLRHESAETGEFVGVIQFLGGARGACSYLVAETFMEDNKKYKEMNIAKDAFHCLICLEGIEVGTTVIPIPYPHLLYEGCLINWLQRRNTCPQCRYRILQFSILHLKILPVNDFYKQYYKTLHSIEHTIVMKVIFEKRNFHEDAENAVLEYGIWLSVQPKRGDEIEFVCCSEGWEETEGVGSKRDNQGKEQRQIEGSKLQRLRRKCGMEEEFCVGQIGSSGELALWCKKDVTINVWHASKNIIHKSISPAGRKVPNYVTYVYGAPRDKEKIEERLDRTVSNVEFRKAFQGVMVLHIELVGSDHQLLCKRSKNKIVKLKGREGQWLEKEENINKAFTEFCSRLFASEGCVGLEAVLEFVQKSVTKEDNQMLIR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1150 438 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 169 IPR013083 -
Lele04g1150 438 SUPERFAMILY RING/U-box 116 164 - -
Lele04g1150 438 Pfam X-domain of DnaJ-containing 5 66 IPR026894 -
Lele04g1150 438 Pfam Ring finger domain 119 161 IPR001841 -
Lele04g1150 438 ProSiteProfiles Zinc finger RING-type profile. 120 161 IPR001841 -
Lele04g1150 438 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1150 Lele-ChrLele04 8456552 8464818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1150 89 163 C3H Transcription Factor Family AT3G55530 32.000 1.41e-07 50.8