Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1112 ATGGCACCTGTTTCACTGCCTCCTGGTTTCAGGTTCCACCCTACAGATGAAGAGCTGGTTGCTTATTATCTCAAAAGAAAGATCAACGGCCACAAGATTGAGTTAGAGATCATCCCCGAAGTTGATCTTTACAAGTGCGAGCCCTGGGACTTGCCTGGAAAATCCTTGTTACCGGGAAAAGATTTGGAGTGGTATTTCTTCGGTCCTCGAGATAGGAAGTACCCAAATGGGTCAAGAACAAATCGAGCCACCAAATCTGGATATTGGAAAGCCACAGGGAAGGACAGGAAAGTGAATTCTCAATCTCGTGCAGTGGGTATGAAGAAAACCCTAGTTTACTATCGAGGTCGAGCCCCTCATGGATGTCGTACCAACTGGGTCATGCATGAGTATCGTCTTGACGAAAGAGAATGTGAAGACGTTGCTTCTGGCATTCAGGATGCTTATGCTCTCTGTCGTGTGTTCAAGAAGACTGCAGTTATAACAACGAAAATAGGAGAGCAATATGTGAATGAAAATCAGATTATGAATACGAGTGATCAGGCATCTAGCATTGAACTATACTCTGAAGGAAGATCGGGAGAAGATTTAGAGAGCTCAGATTATTTGATGCGTATGGATCATAGCTCATCACCCCATAATATTGGAAATCCCCCTTCAGGACCAAGAGATAATCATGGGAAATGGTCACAGACACAGTTCTTATCTGAAGATCCATTCTCTCTTCCAAATTCTTCTTCATTATTTTCCAACTATGGCTCCATACTATACCCTCCATCCAAGGTGGATATTGCACTAGAATGTGCGAGGATGCAGCATAGGTTTTCTCCAATGGAGGACATTCCTTCTGAACTGAAGATGCAAGCACAATATGGTGGGACAAAAAATGAAGCTGATGAGTTACTACAGGAGATTCTTTCAGTTTCTCATGCTTCTCAGGAACTCATAAACCAGTATTCTCACTCATGGGGTGGTACTACTAGTAGTACTGAAAACCACCTGCAGCATTATGCTCCTTCTGAACAAGAACATGATTTCACTTTCATGGTTGGCAGAGATAATAGTACTGCTAATGACTATAACTATTATAATAACAACAATGCCTGCTGGGAAGATCCAGTAATAAACACAAGATCAATAGAGATTGGAGATCTGGATGATGATTTCAAAGCAGAGAGGATCGTTGAGAATTTAAGATGGGTTGGCATGTCAAGCAAGGATTTGGAAATTAAGGGCTATATGGAAGATCAGAAAATTGTTCCAATTGACGATATTTCAAGTTTCCGAGCAAACGGGGAGGGGAATGAACTGCTGCAAGAATGTGAAAATCAGCAAGAAAATAGCAGCAAGGAACTGAATGAAACTGACATAAATGACATCTCATTAGGGTTCATGAACGAGGATGACACTAATGAGAACTTGATAGATGAAGAAGGTGATGATTATTCGAGTTCTCCGAGCTTTGAGATGGTTGAAGAAGTCAAAGTAGTGAGCCAGGGAATGTTTGTGTCCACAAGACAAGTAGCTGACACATTCTTTCACCAAATAGTTCCTTCACAAACCCTCAAGGTTCACCTCAATCCAGTGATAATGGCGCACAATTATCACACATCAGTGGAGAACATAGAAACAGTTTCTTTCTCAAGAAACTTGAAGGCATGTGTGATGAAGACAATAACAAGTCCCATTGTATTCATGTTTTCACTTCTGCTGATGATGCATTGTATTTATTATTCGGATTCTGATGTGAAGGATCAGAGAATTTGGGGTTATGGTACTGCTCATAACAGCATGAAGAGAATGAGAGAATATGAAGAAGATGATGAAAAGGAGGAAGTTTGGTTTGTGAGGATCAAAAGTGGGAAAGGATTCAGTGTGGTGGTGAGGAAGATAGGCATTTTTCTCACAGTTTCTTTTGCTCTTTGTACCATGTGGGCGAACCACATCGTAGTTCATTAA 1959 0.4114 MAPVSLPPGFRFHPTDEELVAYYLKRKINGHKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFGPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQSRAVGMKKTLVYYRGRAPHGCRTNWVMHEYRLDERECEDVASGIQDAYALCRVFKKTAVITTKIGEQYVNENQIMNTSDQASSIELYSEGRSGEDLESSDYLMRMDHSSSPHNIGNPPSGPRDNHGKWSQTQFLSEDPFSLPNSSSLFSNYGSILYPPSKVDIALECARMQHRFSPMEDIPSELKMQAQYGGTKNEADELLQEILSVSHASQELINQYSHSWGGTTSSTENHLQHYAPSEQEHDFTFMVGRDNSTANDYNYYNNNNACWEDPVINTRSIEIGDLDDDFKAERIVENLRWVGMSSKDLEIKGYMEDQKIVPIDDISSFRANGEGNELLQECENQQENSSKELNETDINDISLGFMNEDDTNENLIDEEGDDYSSSPSFEMVEEVKVVSQGMFVSTRQVADTFFHQIVPSQTLKVHLNPVIMAHNYHTSVENIETVSFSRNLKACVMKTITSPIVFMFSLLLMMHCIYYSDSDVKDQRIWGYGTAHNSMKRMREYEEDDEKEEVWFVRIKSGKGFSVVVRKIGIFLTVSFALCTMWANHIVVH 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1112 652 FunFam Nac domain-containing protein 86 15 160 - -
Lele04g1112 652 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 273 - -
Lele04g1112 652 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Lele04g1112 652 Coils Coil 438 458 - -
Lele04g1112 652 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Lele04g1112 652 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Lele04g1112 652 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Lele04g1112 652 MobiDBLite consensus disorder prediction 206 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1112 Lele-ChrLele04 6986109 6989779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1112 1 591 NAC Transcription Factor Family AT1G65910 47.117 5.96e-163 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele04g1112 NAM 7e-40 No_clan