Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1095 ATGACCACTAAAGGATGGTGGCACATGCCTTCTGTCACATCAGTCTGTAATGTACAATCCAGATTTTCCAGTACGGATGATCCAATGGCTAAGCTTGGCTCTTGCCATTACTCTTACAGAGACTCTCCTTCTCTCTCTCTCTACTGCACACAGGTCCAGCTTTGGTCGGTACCCCCTTATAAGGGGCAAAGATTACTACAAGATTCTGTATCTTTAAAAGAAAGGAAAAGAAAAGTGAAGCTTGATATGAAGCTTTCAACATCAGGGTTGGGTCAGCAGGGACAAGAAGGAGGGGAGAAGAAATGTCTGAATTCCGAGCTGTGGCATGCATGCGCGGGTCCTCTCGTGTCCCTACCAAATGCAGGGACTCGTGTGGTTTACTTCCCTCAGGGTCACAGCGAGCAGGTTGCAGCCACAACTAACAGAGAACTTGATGGGCACATACCCAATTACCCGAGCTTGCCGCCCCAGTTAATTTGCCAACTTCATAATGTCACAATGCATGCTGATGTTGAAACAGATGAAGTATATGCTCAAATGACACTGCAGCCCTTGACTCCGCAAGAGCAGAAGGAAACATTTCTTCCTTTGGAATTGGGCATTCCGAGCAAACAGCCCTCAAATTATTTTTGCAAGACATTAACAGCAAGTGACACCAGCACACATGGAGGGTTTTCTGTTCCTCGTCGTGCAGCTGAGAAAGTTTTCCCCCCACTGGATTTCTCACAGCAGCCACCAGCACAAGAAATAATTGCTAGGGACCTCCATGATGTTGAGTGGAAGTTCAGACACATTTTTCGCGGACAGCCGAAAAGACACCTTCTTACAACAGGCTGGAGTGTATTTGTTAGTGCCAAGAGACTTGTGGCCGGAGATTCTGTGCTATTTATATCGAATGAAAAGAATCAGCTACTTTTAGGAATACGACGTGCCAGTCGTCCCCAAACTGTGATGCCATCGTCAGTTCTTTCAACTGATAGTATGCACATTGGACTTCTTGCAGCTGCTGCTCATGCTGCTGCAACTAATAGCTGTTTTACAGTGTTCTATAATCCAAGGGCTAGTCCTTCTGAGTTTGTCATATCACTTTCAAAATATGTCAAGGCTGTGTACCATACACGTGTTTCAGTTGGCATGCGATTCAGGATGCTTTTTGAGACTGAGGAATCAAGTGTACGCAGGTACATGGGTACAATAACTGGCATAAGTGATCTGGATCCTGTTCGTTGGCCAAATTCTCATTGGCGATCTGTCAAGGTTGGTTGGGATGAATCGACAGCAGGAGATAGGCAGCCACGGGTTTCATTATGGGAAATCGAGCCTTTGACAACATTCCCGATGTATCCATCACTATTTCCCCTCAGATTGAAGCGGCCTTGGCATCCTGGCTCTTCATCTTTGCATGATGGAAGAGATGATGCAGGGCTGATGTGGCTGAGAGGTGGACCTGGAGATCAAGGTCTCAACTCGCTCAATTTTCAAGGCGGTGGTTTGTTGCCGTGGATGCAACCGAGACTAGATCCAACTTTGCTAGGAAATGACCATAATCAACAGTATCAAGCCATGTTGGCAGCTGGTTTGCAGAACCTAGGGAGCGGAGATCTCTTGCGTCAACAAATGATGAATTTGCAACAACCATTCCATTATCTTCAACAACTGGGAAACCATAATTCACTGCAGCTTCAGCAGCCGCATCAAGCAATTCAGCAATCAATGAGTTCTAATATCCTTCAGCCACAAACTCAAGTGTTGGCAGAGAACTTGTCTCAGCACCTCCTTCAGAAACCACATAACAATCAAGAAGACCAAGCACAGCTGCAGCAACCGCAGAATAATTATCATGATGCATTTTTTATTCAGAGTGATCAGCTCCCACAGAGGCAACACTCCCATGCTCCTTCGCCATCATATTCGAAACCTGATTTCTTTGATTCGAGCATAAAGTTCTCATCGGTTTCCCCTGGACAGAACATGCTCAGTTCACTTTGTCCTGAAGGGAGTAGCAATCTTTTCAGCTTACCCAGAAGCAGTCAGTCCACGCTGACTGAACAATTGGGCCAACAACAATCATGGAGTCCGAAGTATGCGCCTGTGCAGGTGAGTGCTGCCTTTGGTAACTCAATGTCACACTCGCAATATACCGAGAAAGATTCTGCAATGGTGCCATCGCATTGTACTTCAGATGCCCAGAATCCTACTCTCTTTGGGGTTAATATTGATTCATCTGGATTTCTTCTCCCCACCACTGTCCCGGGTTATTCAACTTCCTCGGTTGGTACTGATGCATCAACCATGGCATTAGGGGACTCTGGGTTCCAGGGTTCTCTGTATAATTGTGTGCAAGATTCTGCAGAGTTAATTCAGAGTTCAGGGCAAGTTGACCCGCAAAACCAAACTCAGACATTTGTCAAGGTCTACAAATCAGGTTCGGTTGGGCGCTCACTTGACATCTCTCGGTTCAGCAGCTATCATGAGCTGAGAGAGGAGTTGGCCCAAATGTTTGGAATTGAGGGAAAGTTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTCGATAGGGAGAATGATGTTCTTCTCCTTGGAGACGACCCGTGGGAATCTTTCGTCAATAATGTTTGGTACATCAAGATACTCTCACCTGAGGATATTATGAAGATGGGCGAACAATCGGTGGAATCATCGCTTGGTCCGAGCGCGGGACAAAGGATGAACAGCAGCACTGCGGAATCTCAGGACCTTTCTGGCTTTCCATCGATGGGCTCGCTTGAATACTGA 2781 0.4642 MTTKGWWHMPSVTSVCNVQSRFSSTDDPMAKLGSCHYSYRDSPSLSLYCTQVQLWSVPPYKGQRLLQDSVSLKERKRKVKLDMKLSTSGLGQQGQEGGEKKCLNSELWHACAGPLVSLPNAGTRVVYFPQGHSEQVAATTNRELDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPLELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQEIIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFISNEKNQLLLGIRRASRPQTVMPSSVLSTDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVISLSKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGSSSLHDGRDDAGLMWLRGGPGDQGLNSLNFQGGGLLPWMQPRLDPTLLGNDHNQQYQAMLAAGLQNLGSGDLLRQQMMNLQQPFHYLQQLGNHNSLQLQQPHQAIQQSMSSNILQPQTQVLAENLSQHLLQKPHNNQEDQAQLQQPQNNYHDAFFIQSDQLPQRQHSHAPSPSYSKPDFFDSSIKFSSVSPGQNMLSSLCPEGSSNLFSLPRSSQSTLTEQLGQQQSWSPKYAPVQVSAAFGNSMSHSQYTEKDSAMVPSHCTSDAQNPTLFGVNIDSSGFLLPTTVPGYSTSSVGTDASTMALGDSGFQGSLYNCVQDSAELIQSSGQVDPQNQTQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIMKMGEQSVESSLGPSAGQRMNSSTAESQDLSGFPSMGSLEY 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1095 926 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 99 889 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele04g1095 926 Pfam AUX/IAA family 796 886 IPR033389 -
Lele04g1095 926 ProSiteProfiles PB1 domain profile. 800 884 IPR000270 GO:0005515
Lele04g1095 926 Pfam Auxin response factor 336 419 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele04g1095 926 CDD B3_DNA 209 310 IPR003340 GO:0003677
Lele04g1095 926 Pfam B3 DNA binding domain 210 311 IPR003340 GO:0003677
Lele04g1095 926 MobiDBLite consensus disorder prediction 893 919 - -
Lele04g1095 926 Gene3D - 208 311 IPR015300 -
Lele04g1095 926 ProSiteProfiles B3 DNA-binding domain profile. 210 312 IPR003340 GO:0003677
Lele04g1095 926 SUPERFAMILY DNA-binding pseudobarrel domain 194 339 IPR015300 -
Lele04g1095 926 MobiDBLite consensus disorder prediction 673 692 - -
Lele04g1095 926 FunFam Auxin response factor 374 446 - -
Lele04g1095 926 SUPERFAMILY CAD & PB1 domains 792 874 - -
Lele04g1095 926 SMART B3_2 210 312 IPR003340 GO:0003677
Lele04g1095 926 FunFam Auxin response factor 795 889 - -
Lele04g1095 926 Gene3D - 796 889 - -
Lele04g1095 926 Gene3D - 374 446 - -
Lele04g1095 926 MobiDBLite consensus disorder prediction 890 926 - -
Lele04g1095 926 FunFam Auxin response factor 208 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1095 Lele-ChrLele04 6865849 6872523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1095 180 891 B3 DNA Binding Superfamily AT5G37020 68.923 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele04g1095 AUX_IAA 5.3e-08 CL0072